Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1716 |
Symbol | |
ID | 6202886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1895752 |
End bp | 1896957 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641703226 |
Product | radical SAM protein |
Protein accession | YP_001830394 |
Protein GI | 182682234 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.973881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTCCCA GTGTGACAAC AACGACAACT AGTGGTGAGC CCATCGCTAG CGATGTTGCT CGTAAACAGA ATCTGCTGGA ACTTGACCGT GAGGGGTTGG AGCGCTTTTT CGAAGATGTT CTTGGTGAGA AACGCTATCG TGCCCATCAG GTCATGAAAT GGATCCACCA CCGTTATGTC GCTGATTTCG AGCAAATGAC CGATGTTGGC AAAGCGTTGC GTACTAGGTT GCAGGCTTGC GCTGAGGTCA GGGTCCCCCG TGTTGTCTTC GACAAGCACT CAGCCGATGG CACACACAAG TGGTTGCTGG CGATGGGCAC TGACAGAAAA AATGCGATTG AGACTGTTTA TATCCCGGAC AAAGGGCGTG GTACGTTGTG TGTGTCTTCG CAAATAGGGT GTGGATTGAA CTGTACGTTT TGTTCGACAG CCACCCAAGG TTTTAACCGC AATCTGACCA CGGCCGAGAT TATCGGCCAG GTTTGGGTTG CTGCCCGTCA CCTTGGTAAT GTGCCGCACC AGCAGCGTCG TCTTACGAAT GTGGTAATGA TGGGTATGGG TGAGCCCTTA ATGAATTTCG ATAACGTTGT GCGTGCGATG AGCGTGATGC GTGATGATTT GGGCTACGGG TTGTCCAACA AGCGTGTGAC TTTATCGACT TCCGGTTTAG TTCCGATGAT TGATCGCCTC TCGACTGAGA GTGATGTGTC TTTGGCTGTA TCACTGCATG CGCCGAATGA CAAACTGCGC GAACAACTTG TTCCGTTGAA TAAGAAATAT CCAATTGTTG AGCTGATGGC ATCCTGCGAG CGTTATTTGT CTGTTAATCG TAAACGTGAT TCTGTCACTT TTGAATACAC TTTGATGAAG GGTGTTAATG ACAAGCAAGA ACATGCTCAT GAGTTGGCCA AACTAATGCG GCAATTTGAC TGTGCGATGC AGGTGAAGGG TGCAGCGAAG GTTAACCTGA TTCCATTCAA CCCGTTTCCG GGCACCTGTT ATGAACGTTC TACGGAAGTT GATATCCGTG CTTTCCAGAA GATCCTGTTG GACGCACAAA TTTTGGCCAT GGTGCGTCGT ACTCGTGGAG ACGACATTGA TGCAGCGTGC GGGCAATTGA AAGGGCAAGT CGTGGATCGT ACTCGCCGTC AAGCTGAGTT CCGCCGCACT ATTGAAGATC GGGTTGGTCG AGATGTTGCA GCGTGA
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Protein sequence | MIPSVTTTTT SGEPIASDVA RKQNLLELDR EGLERFFEDV LGEKRYRAHQ VMKWIHHRYV ADFEQMTDVG KALRTRLQAC AEVRVPRVVF DKHSADGTHK WLLAMGTDRK NAIETVYIPD KGRGTLCVSS QIGCGLNCTF CSTATQGFNR NLTTAEIIGQ VWVAARHLGN VPHQQRRLTN VVMMGMGEPL MNFDNVVRAM SVMRDDLGYG LSNKRVTLST SGLVPMIDRL STESDVSLAV SLHAPNDKLR EQLVPLNKKY PIVELMASCE RYLSVNRKRD SVTFEYTLMK GVNDKQEHAH ELAKLMRQFD CAMQVKGAAK VNLIPFNPFP GTCYERSTEV DIRAFQKILL DAQILAMVRR TRGDDIDAAC GQLKGQVVDR TRRQAEFRRT IEDRVGRDVA A
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