| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1665 |
|---|
| Symbol | |
|---|
| ID | 6203780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1843394 |
|---|
| End bp | 1844299 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641703177 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001830346 |
|---|
| Protein GI | 182682186 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2930] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGCC TACCATACTT AACCATGCTG CTGTCGCTTG CTCTTGCTGC TGGCCACGCG
TTCGCCGGCC CGGAAGAAGA CCAGCGCGCT CGCAATGCGC TACGCGTGCT GACCGAGCTT
CAGAGAATCC CAGAGCAAAC CATTCCAGAC AAACTGCTAG AAGAAGCACG TGCGATCGTC
ATCATTCCCG ACACGCTCAA AGTGGGCTTC ATCATTGGCG GACGCCGTGG CCAAGGCCTC
ATGTCGATCA AGACACCACA AAACACATGG TCTCAGCCCG TATTTGTGAA ACTGACCGGC
GGCAGCATCG GCCTTCAAGC CGGCGTGCAA TCTTCCGACG TGGTACTCGT GTTCCGCAAT
GACCGCAACT TGGATAACAT CGTTAACGGA AAATTTACTC TTGGCGCAGA TGCCAGCGTG
GCCGCAGGTC CCGTTGGGCG TAATGCGTTG GCAGCGACCG ATAGCGAGCT AAAGGCCGAG
ATCTACTCTT GGTCAACAGC CCGCGGCTTG TTTGCTGGTA TCGCTCTAGA CGGAGCGGCA
CTTCAAATCG ACGACAGTGC CAACCTTGAC GTTTATGGCA AAGGCACCAC TCCACGTATG
ATTTTCGAAG GCCGAACCGC CGAACCTCCC TCCAGCGATG TGATCGCGTT CCGTGATCGC
CTGGAGGAAG TCACTTATAC AGCACGCAAT AACCGTAATA ACACCACAAA ACAAAGTGGA
TGGAACCAGC ACACCAGCAC ACCCAGGCCT GGCACAACAG TGAGAGTGAC ACCATCGGCC
AAGGCAACCC AGGAAGCCAT GACGACCCCG ATTCAATCCG AGGCAACCGC CGCAATCCCA
GCACAACAAG GCTTCCAGCC AGTCTCCGAA GATGGCATCC ACACCGAATC TCTCGATCAC
CACTAA
|
|---|
| Protein sequence | MPRLPYLTML LSLALAAGHA FAGPEEDQRA RNALRVLTEL QRIPEQTIPD KLLEEARAIV
IIPDTLKVGF IIGGRRGQGL MSIKTPQNTW SQPVFVKLTG GSIGLQAGVQ SSDVVLVFRN
DRNLDNIVNG KFTLGADASV AAGPVGRNAL AATDSELKAE IYSWSTARGL FAGIALDGAA
LQIDDSANLD VYGKGTTPRM IFEGRTAEPP SSDVIAFRDR LEEVTYTARN NRNNTTKQSG
WNQHTSTPRP GTTVRVTPSA KATQEAMTTP IQSEATAAIP AQQGFQPVSE DGIHTESLDH
H
|
|---|
| |