Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1642 |
Symbol | |
ID | 6202781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1821216 |
End bp | 1822196 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641703154 |
Product | ApbE family lipoprotein |
Protein accession | YP_001830323 |
Protein GI | 182682163 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAC CCAACCTCAA CCTTGCCACC CTGGGTGGCT ACACCATGGG CACCACCTGG AGCGTGAAAC TGGCTGCACC ACGACGACTC GACCTACACC CACTACACAA TGCAATCCAA GCACGACTCG ACCAGATTGT CGCGGAAATG AGCACATGGG AGCCGAACAG TCACATTAGT CGTTTCAACC GCGCACCAGT CCGCTCATGG CATCCCCTAC CAAACGATTT CGACTTAGTA CTACGTACCG CCCTGGACAT CGCAATGACC AGCAACGGCG CATTTGATCC AACCGTTGGA CCGTTGGTGA GGCTATGGGG CTTCGGTGCC TACAGCGGCA ATCACAAACA AATACCAACA CCTGAAGCAA TCACTCTGGC AACAACACGC GTAGGCTGGC AACACCTGGA GCGCACCACT GACGGACATT GGCTGCAACC TGGTGGAACC GAACTTGACC TATCAGCAAT CGCCAAGGGA TATAGCGTGG ACGCCGTCGC CGCCACACTA CATGCCAAAG GCGTGGAACA TGCGTTAGTA GACATTGGAG GCGAGTTATA TGGCTATGGA CATAAACCTG ACGGCACCCC TTGGAGTGTC CTGGTAGAAA TGGATCTCAC ACACCAATAT GGCAATCCAC TGCCACCGTG CATCCTACAA CTGGATGGAC TTGCAGTCGC CACCTCTGGG GACCGCTGGC ACCACTTCGA ACACGAAGGT CAACGCTACA CACACACTAT CGACCCTCAC CAAGGCACCC CTATCCCTGA CGCACCTGCA CTAGTCACCA TGATCGCAAG CAGTGCAATG CACGCCGATG CCTGGGCAAC CGCTCTAAAC ACGCTAGGCC GCGAAGCCGG CTTGGCACTA GCCAACACAC TCGGATTAGC GGTTCGCTAT CTAGAACACA ACAATGACGC ATTCACCGCT TACTACAGTC CTGCCTTCAC TCGCTTGCTA CACAAACCAG CAACAGCATG A
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Protein sequence | MNTPNLNLAT LGGYTMGTTW SVKLAAPRRL DLHPLHNAIQ ARLDQIVAEM STWEPNSHIS RFNRAPVRSW HPLPNDFDLV LRTALDIAMT SNGAFDPTVG PLVRLWGFGA YSGNHKQIPT PEAITLATTR VGWQHLERTT DGHWLQPGGT ELDLSAIAKG YSVDAVAATL HAKGVEHALV DIGGELYGYG HKPDGTPWSV LVEMDLTHQY GNPLPPCILQ LDGLAVATSG DRWHHFEHEG QRYTHTIDPH QGTPIPDAPA LVTMIASSAM HADAWATALN TLGREAGLAL ANTLGLAVRY LEHNNDAFTA YYSPAFTRLL HKPATA
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