| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1519 |
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| Symbol | ispH |
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| ID | 6204074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1685989 |
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| End bp | 1686939 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641703030 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001830201 |
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| Protein GI | 182682041 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00815461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTC TGCTCGCTAA TCCGCGCGGC TTCTGTGCAG GCGTTGATCG CGCCATCGAA
ATCGTTAAAC GCACCATCGA CATGCTGGGA ACCCCCATCT ACGTCCGTCA TGAAGTCGTC
CATAACCGCT TTGTCGTTGA TGACCTAAAA CAGCGCGGCG CCATCTTCGT TGAAGAACTC
CACCAAGTCC CCGATGGCGC CACCGTCATT TTCAGCGCCC ATGGCGTCTC CCAGGCCGTA
CGCCGCCAAG CCGCACAACG CGGCCTAAAA GTCTTTGACG CCACCTGTCC CCTCGTCACC
AAAGTCCACC TAGACGTCGC CCGCCACTGC CGTACTGGAC GCGACATGAT CCTCATCGGC
CATGCCGGAC ACCCAGAAGT GGAGGGCACC ATGGGTCAAT GGGACCAAGA GCGCGGTACC
GGTCGTATCT ACCTAGTGGA AAATATCGAC GATGTCGCCA CCCTCCATGT TGCCCAACCC
CACCATCTGG CCTACACCAC CCAAACCACC CTCTCCGTTG ACGACACCCG CAACATCATT
GACGCCTTAC GCCAACGTTT CCCAACCATC CAAGGACCCA AAAACAATGA CATCTGCTAC
GCCACCCAGA ACCGCCAAGA TGCAGTTCGC GAACTCGCGC GCGAATGCGA CCTAGTCCTC
GTCGTCGGCT CCCCAAACAG CTCCAACTCC AACCGACTCA GCGAACTCGC ACAACGCGAA
GGCGTTGCCT CCTATCTCAT CGACAGCGCC GCCGAAATTG ACCCCGCCTG GGTCATCGAC
AAACACCACA TTGGTGTGAC CGCCGGCGCC TCCGCCCCTC AAGTCTTGGT TGACGGCGTC
CTAGCACGCC TCTACGAACT CGGCGCAACC AGCGTCTCCG AACACAGCGG CAAACCAGAA
TCTATGGTCT TTGCCCTCCC CAAAGCACTG CGCCTACAAC TCGTGGATTA A
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| Protein sequence | MKVLLANPRG FCAGVDRAIE IVKRTIDMLG TPIYVRHEVV HNRFVVDDLK QRGAIFVEEL
HQVPDGATVI FSAHGVSQAV RRQAAQRGLK VFDATCPLVT KVHLDVARHC RTGRDMILIG
HAGHPEVEGT MGQWDQERGT GRIYLVENID DVATLHVAQP HHLAYTTQTT LSVDDTRNII
DALRQRFPTI QGPKNNDICY ATQNRQDAVR ELARECDLVL VVGSPNSSNS NRLSELAQRE
GVASYLIDSA AEIDPAWVID KHHIGVTAGA SAPQVLVDGV LARLYELGAT SVSEHSGKPE
SMVFALPKAL RLQLVD
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