| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1377 |
|---|
| Symbol | recO |
|---|
| ID | 6202391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1524219 |
|---|
| End bp | 1524950 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641702896 |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_001830069 |
|---|
| Protein GI | 182681909 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCG AACATGAAGT CGCCTTCGTC CTGCATGTAC GTCCCTGGCG CGAAACCAGT
TTACTGGTCG AAGTACTGAC CCAGGCATAT GGGCGTCTTG GCTTGATCGC ACGTGGTGTA
CAAGGACTGA AAAAACAAAC ATTACGTGCA GCGTTGCAAC CGCTACAGTG GATCCGATTC
AGTGCGATAC AACGTGGCGA ACTTGGCCAA TTACGCCAAG CCGAAGCACT GGACACTGCC
CCACGCCTCA AAGGCGAAAC CATGTTAGCC AGTTTCTACA TTAACGAATT GCTATTGCGC
TTAGTGCCAC GCCACGCCCC AGTCAACGAA CTGTATCTTG CCTATTCACA GACACGGGAA
CGCCTACGCA CCAATGATTC CTTAGCCTGG TCACTTCGCC TTTTTGAACT CGACATACTC
GAAACACTAG GCGTTGGCTT CAACCTAGAA TGCGATGCAA ACGGTACACC ACTTGACCCC
GCCGCCCGCT ATGTTCTTGA TCCATTAGAA GGGCCACGCC TTCTACTCAG CGAACACAAC
AACGCTGAGC GACGCGACAC TGCCACCGGA CACGTACTCC TGGCATTAGC GCACAAGCAA
ATACCAAATA CCAATGATTT GGCTGGCCTA CGCCGCAGCA TGCGTGCAGT CCTGTTACAC
CACCTGGGCG GCCGCGGCCT GAAGTCGTGG GAAATGATCG CTGCATTCAG ACACCAGGAC
ACATCACCGT AA
|
|---|
| Protein sequence | MLIEHEVAFV LHVRPWRETS LLVEVLTQAY GRLGLIARGV QGLKKQTLRA ALQPLQWIRF
SAIQRGELGQ LRQAEALDTA PRLKGETMLA SFYINELLLR LVPRHAPVNE LYLAYSQTRE
RLRTNDSLAW SLRLFELDIL ETLGVGFNLE CDANGTPLDP AARYVLDPLE GPRLLLSEHN
NAERRDTATG HVLLALAHKQ IPNTNDLAGL RRSMRAVLLH HLGGRGLKSW EMIAAFRHQD
TSP
|
|---|
| |