Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1241 |
Symbol | |
ID | 6201945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 1375966 |
End bp | 1377246 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641702766 |
Product | glucose/galactose transporter |
Protein accession | YP_001829940 |
Protein GI | 182681780 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease [TIGR01272] glucose/galactose transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.184837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCTA ATAAAACTGT CAGTAACAAT GTTGCAATGG CGGTAGCTAC CACGATTTTT TTTATGTGGG GATTTTTGAC ATGTCTCAAT GATATTTTGA TCCCACATTT GAAGGCGGTT TTTGAGCTTA ATTTTTCGCA AGCGATGTTA GTGCAGTTCA CGTTCTTTGG TGCTTATTTC TTGATGTCAT TGCCTGCTGA GTACGTGGTG GCGCGGCTGG GATATAAGAA AGGTATTGTT GCTGGTTTGT TGATTGCTGC AATCGGTACA TTCTGTTTCT GGCCGGCAGC AGAAATGCGT GTGTATGGGT CATTCCTTGG CGCGTTGTTT ATATTGGCCA CTGGTATCAC TGTGTTGCAG GTTGCTGCGA ATCCATTTGT TTCTTTGCTA GGTGCCGAGC GTAATGCTTC TGCACGGCTG ACATTGGCTC AGGGGTTTAA TTCGTTAGGC ACTGCAATTG CACCTTTGAT CGGCGGCTGG TTTATTCTGT CTGGTACGGT GAAGAGTGCC GATGAGTTGC AGACGTTGTC TGCGGCGGAG CAATTGGCCT ACCGGGTTCA AGAAGCGCAA TCGGTACAAG GGCCTTATCT TGTGCTGACT TTGGTCCTGG TAGTGTTGGC TGCAATAGTG TTTCTTTTTC GGCTGCCTCA CTTAAAGGAA TCTACAGAAC AAAATGTTCG GGGGCATCAT TACACTCTCA GTGACGCATT ACGTCATCCG CATGTGATAT TTAGTGTATT GGCGATCTTT TGTTATGTCG GTGCGGAAGT AGCCATTGGT AGTTTGATGG TCAGTTACTT CTCAATGCCA CACATTGGTG GTTTTAGTGA GCAGCAGGCG ACGCACTACG TCAGCATTTA CTGGACATTG GCGATGGTGG GCCGTTTCGC TGGTTCTGGG TTGCTGACGT TGTTCCAGCC GCGTAGGTTG TTGGCGTTTT TCGCGCTGAT TAATGCGGGG ATACTTGGTG TTAGTGTGGC GACGAGTGGC ATAACAGCGG TCTATGCGTT GGTTGCCATT GGTCTATTTA ATTCGATCAT GTTTCCAACC ATTTTCACTT TGGGTATTGA GCGTCTTGGG CCACTGACCG GACGTGCTTC GAGTCTAATG ATTATGGCGA TCGTTGGTGG TGCGGTGGTG CCGTATTTAC AGGGTGTGTT AGCCGATCAT GTCGGTTTGC AGGTGTCGTT CTTGCTGCCG CTGTTTTGTT ATCTCTACAT TGTGTTCTAT GGAATATGGG GTTCGTGTAT CCGCGGTGTA CTGACTGAGC GTCTGTCGTG A
|
Protein sequence | MTSNKTVSNN VAMAVATTIF FMWGFLTCLN DILIPHLKAV FELNFSQAML VQFTFFGAYF LMSLPAEYVV ARLGYKKGIV AGLLIAAIGT FCFWPAAEMR VYGSFLGALF ILATGITVLQ VAANPFVSLL GAERNASARL TLAQGFNSLG TAIAPLIGGW FILSGTVKSA DELQTLSAAE QLAYRVQEAQ SVQGPYLVLT LVLVVLAAIV FLFRLPHLKE STEQNVRGHH YTLSDALRHP HVIFSVLAIF CYVGAEVAIG SLMVSYFSMP HIGGFSEQQA THYVSIYWTL AMVGRFAGSG LLTLFQPRRL LAFFALINAG ILGVSVATSG ITAVYALVAI GLFNSIMFPT IFTLGIERLG PLTGRASSLM IMAIVGGAVV PYLQGVLADH VGLQVSFLLP LFCYLYIVFY GIWGSCIRGV LTERLS
|
| |