| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1221 |
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| Symbol | |
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| ID | 6203261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1353613 |
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| End bp | 1354647 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641702749 |
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| Product | twitching motility protein |
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| Protein accession | YP_001829923 |
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| Protein GI | 182681763 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.475571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTG CTGAACTGTT AGCGTTTTCA GTCAAAAACA ATGCTTCGGA CCTGCACCTG
TCAGCAGGCC TGCCACCAAT GATCAGGGTG GACGGCGATG TACGCCGTAT CAATATCCCC
GCATTCGACC ATAAGCAGGT GCAATCGCTA ATTTACGACA TCATGTCGGA TAAGCAACGA
CGCGACTATG AGGAAGCCCT GGAGACGGAT TTTTCGTTCG AAATCCCTTC ACTCTCCCGC
TTCCGTGTCA ATGCATTCAA CCAAGAGCGT GGTGCTGGTG CCGTGTTTCG CACCATTCCC
AATAAGGTGA TGACATTGGA CGAACTCGGC TGTTTGCCGG TGTTCCGCAA ACTCATTGAA
GAACCGCAGG GGTTGATTCT GGTGACTGGG CCGACTGGCT CTGGAAAATC GACCACCCTC
GCAGCCATGA TCGACCATAT CAACAAAAAT GCTCACGGGC ATATTCTCAC GATAGAGGAC
CCGATTGAGT TCGTTCACAC CTCACAGAAG TGCTTGATTA ACCAACGTGA GGTACATCGC
GATACTCACG ACTTCAACAA AGCACTCAGC TCAGCACTGC GCGAAGATCC AGACATCATC
TTGATTGGAG AATTGCGTGA CCTAGAAACG ATCCGTCTAG CACTGACTGC AGCCGAAACT
GGCCACTTGG TATTTGGCAC CCTGCACACC AATTCAGCAG CTAAAAGTAT TAACCGCATC
ATCGACGTGT TTCCCGCTGC TGAAAAACCG ATGGTCCGCT CTATGCTTTC CGAATCGCTC
TGCGGGATCA TCTCGCAAAT GTTGTTGAAA AAAGTTGGTG GTGGACGTAC CGCAGCCTGG
GAAATTATGG TTGGCACCCC CGCAATCCGA AATTTGATCC GTGAGGATAA AGTCGCACAG
ATGTATTCAT CCATCCAAAC TGGCCAGCAA TATGGCATGC AGACCCTTGA CCAGCATTTA
CAGGATCTCA TCAAACGCAA CCTGATCACA CGACAGCAAG CACGTGAATA CGCCAAGGAT
AAAGCGAATT TTTGA
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| Protein sequence | MDIAELLAFS VKNNASDLHL SAGLPPMIRV DGDVRRINIP AFDHKQVQSL IYDIMSDKQR
RDYEEALETD FSFEIPSLSR FRVNAFNQER GAGAVFRTIP NKVMTLDELG CLPVFRKLIE
EPQGLILVTG PTGSGKSTTL AAMIDHINKN AHGHILTIED PIEFVHTSQK CLINQREVHR
DTHDFNKALS SALREDPDII LIGELRDLET IRLALTAAET GHLVFGTLHT NSAAKSINRI
IDVFPAAEKP MVRSMLSESL CGIISQMLLK KVGGGRTAAW EIMVGTPAIR NLIREDKVAQ
MYSSIQTGQQ YGMQTLDQHL QDLIKRNLIT RQQAREYAKD KANF
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