Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1066 |
Symbol | |
ID | 6203813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1216176 |
End bp | 1216850 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641702590 |
Product | putative phage repressor |
Protein accession | YP_001829768 |
Protein GI | 182681608 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000341462 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAAT ACGAAATGCG CCGATTAGCG CTTAAAGCTC TATCTGACAA GCTTGGCTAT GGCGGTAAAG CGATGATTGC CGCGAAGATA GGTAAAGATT CCAGTTACGT GTCGCGGATG CTTTATCCGC CAAAGAAAGC TGGTCGCAAG CGAATCGGTG AAGATATGTT TGAGCTTCTG GTTAGAGCGT ATCCAGATGC ATTCAAGGAA ATTGCTACCA TGTCAAGGGC ATTAGATAAT CGGGAGGATA CTAACTATGT TCGTGTTCAG CATATTGAAG CAGAGGCGCA TATGGGACCA GGTCGTATCA ATGAGGATTT ACCTGAAGTT ATAAACTCTG TTGAGTTCCC ACCAAATTAC ATCCGCTCAC TCATTGGATT CTTACCACCA CCAGGCCGAC TCAAGCTGAT TACCGGAACC GGTAATTCAA TGTCGCCAAA GATTCTCCCA GGTGAAACTG TGCTCGTTGA TACTGGTTGC AATACGTTTG TTGGGGATGG GCTTTACCTT GTCAATACAG GTAGCGGTCA GCAAATCAAA GCGTTACATG AGAGAAACGG ATACATCTAC ATTACCAGCA TGGATAAAGA TCTTTATCCT GACTTCGTTG CCGATGAAAA TACAATTATT GGTGGGCGCG TTTATCTCAT TCAGCACTTA GAAAGAGTTT CTTGA
|
Protein sequence | MDKYEMRRLA LKALSDKLGY GGKAMIAAKI GKDSSYVSRM LYPPKKAGRK RIGEDMFELL VRAYPDAFKE IATMSRALDN REDTNYVRVQ HIEAEAHMGP GRINEDLPEV INSVEFPPNY IRSLIGFLPP PGRLKLITGT GNSMSPKILP GETVLVDTGC NTFVGDGLYL VNTGSGQQIK ALHERNGYIY ITSMDKDLYP DFVADENTII GGRVYLIQHL ERVS
|
| |