Gene XfasM23_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0896 
Symbol 
ID6203435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1060631 
End bp1065808 
Gene Length5178 bp 
Protein Length1725 aa 
Translation table11 
GC content49% 
IMG OID641702426 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001829605 
Protein GI182681445 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.720203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAC TTCGTGATGC GATGAGCCAT GCTGTGCTTG GCTGGGTAAA GCCTGATCTA 
GATGAAGCTT TGGGCCAAGC ACGCCAGGAG ATTGAGTTAT TCGTTGAGAA CCCTGTAGAC
ACTAGTCGGA TACTTTCTTG CGCTGATTAC CTGCATCAGG TGCAGGGTAC CTTGCGAATG
CTTGAATTAT ATGCTCCCGC AATGGTGGCC GAGGAAATGG AACGGCTAGC TAAGGTGATG
CAAGTCGATG GAGTCAATGA TCGCGAGGAA GCCTGTGCAG TACTGATGCG CGGCACTCTA
TTGCTGCCTG ATTACCTGGA ACGCTTGCAG AACGGTCATC GTGATATTCC AATTGTTCTT
CTGCCTCTGC TTAACGAGAT CCGTGCTGCG CGTGGCGAAT CAAGATTGAA TGAGAATGTG
TTATTTGCTT TCGACCCTGA GGTGCGCAAT GCCACTGAGG TTGAACTTGA TCATGCACGT
AGCAGTCTGA CTGGATGTAA TCGCCAACTG TTGGATACAG CTGCCAGTGC AGTCAAGGAA
GAGTTGCTCC GAGTCAAAGA AGCTTTGGAT CTGTATCTGC GTATCGGTGG CGATGTTACT
GATTTAAGGA CGCAGATTAC CGTACTGAGT AGTGTTGCTG ATACTTTAGC AATGATGGGT
TTGGGCATGG CTGGCAGCTT GGTCCTGCAA CAGCGTGATG CGTTATTGCG TATTGTTGAA
TCTGATGAGA AAGCTGATGA GGCGCTGTTG TTGGAGATCG CTGGCGCATT GCTCCATGTC
GATGCTTCCT TGGACAACCA AGTCGCCAAC TTGGGTGCAG AGACTGATGC GGATGTGGTT
CTGGCAAACG CAGAAACACG TCGGACGTTA GATGTTCTGG CGCATGAGGC GATTAGCAAT
TTTACTGCAG CCCGTGAATG CTTTATTGCT TTCATTGAGA GTAATTGGGA CCAAGCGCGC
TTGCTTAAGG TCCCAGGTTT GCTCAGCGAA GTTGGCGGTG CGTTGTCAAT TCTTGAGTTG
TCACAAGCTG CAAGCTATCT GGAGGGTGTA CGCCGTTATA TCGAGTGTGA GCTAATTACC
AAGCGTCGTG TGCCTGCTGC TCGTCAGCTG GACACTCTGG CTGATGCGAT GGCCAGTTTG
GAATACTACT TAGAAGCGTT GCGTGAGAGA CGTCCTGGAC GTGAGGACAT ACTCGAAATC
ACACGTAACA GTCTGGAAGC ACTCTCTTAC TGGCCCATCC CTGCTGAAGA GGGGGATAGC
GTTGGTTCCC AACAGAGTAC AGATGTGCTG ACTTTATCTG CTGTGGCTAC AGAATCTATG
TCACCTAACG AAGCGCTACC AGAACTGACT GTGGTTGAAG ATGGAACGGT TACCTTTCAG
GAGGCGGTAT CAGAATTACT TACATTAGTT GAGCCAGAAA GCGCCGACAT CTTCGACGCA
TCGCTGGGGG AGCCGATGCA GCCCATTGTT ACTGATCTAT ACGAAGGAGA TCGACGCAGC
GAGTTGCCCA CTGAATCCAT GCCTGACGAT GAGACGGTTA TCCAAAGTAT ACCTACTGTT
GTTGCACCGC TATCGTCTGG AGGTTTCGAA GATGATGTTG GGGTGATTAT CGACAGTGAT
ATCCGGGATG TATTTCTTGA GGAGCTTGAT GAAGAGCAGG GTAATCTACG GCGCTTGCTG
ACGATCTGGG GTACTGCGCC GGATGACATG GACAGTTTGC GTCAGATCCG TCGTGTGTTT
CATACCCTCA AAGGAAGTGG CCGATTGGTT GGGGCTCTCA CCTTGGGTCA TTTTGCGTGG
AAGATCGAGA ACCTGATTAA TCGTGTCCTG GATGGTTCAC GTGCAGCGAG TCCGGCTGTT
GTCGCACTGG TCGAACGTGC CTGTGAAGTG GTACTTCCGG AGATGAATGC CGCTTTACGT
GGTAAGGCTT CGATCAGCAC TGATTTAGAA GCAACTCAGG CGCTGATTGA TTTGGTTGCA
TCAGGTGAGG AGGCGTTCTA TACGTCGCCA GATAGCATTG CTGACGACTC AGCCACATTA
AAGTTGGTAC CTCAGCTGAT TGAGGGGGGC GCGCCTTTTT TCGTGGACAG TGTACTGCGT
GAAATCCTTG AAGCCGAGAT TGCTAACCAT TTGGATACTA TCAAGGATTG GTTAAATACT
GCTGCTGGCC AATCTTACTC AGTCAACGAG TCATTACTAC GTGCCGTACA CACGTTGAAT
GGTGCTTTCG CTATGACTAA GATGCCGGAA ATTACCCAGG TTATGCAGTC TGCGGAGACT
TATATTAAGC GCCTGCTTAC TAAGCACCAA AAAGCAAGCG TTGAAGGGGT GGGTGTGTTA
TCGGCAATGG CAACAGCGAT TGCCGATACC TTGACTGCGT TGCGGAGTGA TTCACCGCGT
ATTCCTTCGT TTGTGTCTTT GGTCTCATGC TTGTCTGAAT TAGTGACGAC AATGCCTGAT
GGTGGCCAGT CGCAACAGCA GTACTTTGAA AGTGTGGCAG AACAAAACCT TGAAAGTGTC
CCGGAGCAAA CACAGGATGT GTCGCTAAGT AACGATGTAT TGACTGATGT ATACGATTTA
AGTGTTAACT TGGATGTGCT TGAGCCATTA AGTGCTGTAG TCGAGCCAGA AAAGCATATT
GTTGATAGAC CTCAGCATGA GGTAGCGCAT CAATACAACA ATGTGGCCGC ATCGACAATG
AGTGATGTGG TGGCAGCTGA CAGCAACTTA GATGTAGCAG CACATCAATA CGACCTTGTT
TCTGGTAACG AGTCACCTGC TGATGAACTT GGGTTGCTGG CTTTTGATGA ACCAGCTTTT
GAGTTGGTCG ATCTCTTCGT TGAGGAGAGT AGCGACCTGC TTGACCATTG TGACAATTTA
TTAGCAAAGC TGCATGAAGC TCCACAAGAC CGTGAGTTAT TGGTTGGTTT ACAACGTGAC
TTGCATACGC TTAAGGGCGG AGCACGTATG GCTGGGATCA ATGCGATTGG TGATCTGGGT
CATAGCATTG AATCGATGTT GGAATCAGTC ATGGCTGATT ACATTATGCT CAATCGTGAT
GATATGCGCT TGCTGGAATA CAGCTTTGAT TATTTGCATC AGATGTTGAC ACAGACGCGC
CAACATCGCG TTGTGACAAT GCCCAGCGAT CTGGTCGCAA CTCTCAAAGC ACGTACACAG
GGTGCTACGC ATGATGGCAT GTCAAACTTT GGTGAGGTTG CCGAGCTTTC CTTAATTGCT
GATGTTTCTT CAAATACTCT TCTTGATAAA GAATCACAGG TTCTTCCAGA TACGCCTGCC
ATACTCCCTC CGCTGTCGTT GCCAATCCCT TTGGAAGGTC AAGACGAGGA CAGCTCTCTG
GAACGTTTGG TTCAGGAGCA GGTACGCGTA CGTGCTGATC TTCTTGATCG CTTGGTCAAC
CATGCTGGCG AAGTTGCTAT CTATCGTTCG CAGTTGGAGC AGCGTTTAAG TGCTTTCCGT
AATGCGATGT CTGAGTTGGG TCGTACCAAC ACGCGTCTGC GCGATCAGTT ACGTCGACTT
GATTTGGAAA CTGAAGCGCA GATTGTAGCG CGTTACCAAC ACGAAAAAAG CCTAGTTTCA
CGTGACTTCG ATCCATTGGA ATTGGACCGT TTTTCCACTT TGCAACAACT CAGTCGTGCG
TTAAACGAAT CTGCAGCTGA TTTGACGGGT CTACAAGGGG TACTCGACGA GCTGGCACGT
CAATACGATG GCCTACTTCA GCAGCAATTT CGGGTTAGCT CAGAGTTACA AGATGGGCTG
ATGCGTGCAC GCATGGTGCC TTTCAATAGC ATCTTGCCGC GTTTGCGTCG TGTGGTGCGT
CAAGCTGAAG CCGATACTAA CAAGCATGTG CATTTAGTGC TGGAAGGTAC TCACGGTGAG
TTGGATCGCA ACGTGATAGA TCGTATGGTA GCGCCATTAG AACACATGCT GCGCAATGCG
GTAGCACACG GTCTTGAGAT GCCTGAGAAA CGCCGCGCTG CTGGAAAAGC TGATGAGGGT
AAGATCACGA TTCAGCTGCA ACGCGAAGGT TCTGAAATCC TGTTAAAGGT TTCCGACGAT
GGAGCTGGTT TGGATCGAGA TGCGATTCAG CGTCGTGCCA AGCAGCGTGG TTTGATTCCG
ATAGATGTCA ATCTTAGTGA TGCAGAGTTG GATGGAATTA TTTTCACCTC TGGGTTCACT
ACTTATGATG AGGTTAATCA GCTTGCTGGT CGTGGCGTTG GTATGGATGT CGTACGTAGC
GAAGTGAGTC AGCTCGGTGG TTCGGTTAGC ATCAACTCAG TACGCGGTCA CGGCGTAACC
TTCACTCTGC GTCTACCGCA GACACTAGCT GTGACCCAGG CAGTATTCAT TCGGATTGGT
CAGAGCACCT TTGCAGTTCC GGTGGCTTCA GTGATTGGTA TCGGACGGAT TGCACATGAG
CGCTACAAAT CTGACCATGA AAGCTACCAT TACGATGGAG AACAGTACGT ATTGTATGAC
CTAGGTTTCC TGATTGGGCA GCCTGGAATT CATGCTGATC GCCAACAGGT GCCATTATTA
TTGGTGCGCA CTGGTGATTT GCGCGTTGCA GTAGCAGTCG ACGAGGTGCT TGGCAATCGG
GAAATTGTGG TCAAACCGGT TGGATTGCAG ATCGCTTCGG TACCAGGGAT CTATGGAGCT
ACGATCACTG GTGATGGTTG TGTGATTGTT ATTCTGGATT TAGCGCCTTT GGTGCGTCGC
TATTTAAATC AGCCGATACA TTTGGAGGTT GAAGAAGCAC CGGTTACTCA GTCTCAGATG
CCATTGGTCA TGGTAGTCGA TGATTCGCTC ACCATGCGTA AGGTAACTAG CCGCGTATTG
GAACGCCATA ACTTCAGTGT TAGCGTTGCT CGCGATGGTA TTGAAGCACT GGAACTGCTT
GAAGAACGCA TCCCAGACTT GATGTTGTTG GACATTGAGA TGCCACGCAT GGATGGTTAC
GAACTAGTCG CTGCTATGCG CGCTGATGAT CGCTTCAAGA GTATACCTAT TCTAATGATT
ACCTCTCGCA GCGGTGACAA ACATCGTCAA CGTGCCTTTG AAATTGGTGT GCAGCGCTAT
CTTGGGAAAC CTTACCAAGA ATTTGATTTG ATGAAAAATG TATATGATTT ATTAGGGGTT
GTTCGTGTCC GAGAATGA
 
Protein sequence
MNALRDAMSH AVLGWVKPDL DEALGQARQE IELFVENPVD TSRILSCADY LHQVQGTLRM 
LELYAPAMVA EEMERLAKVM QVDGVNDREE ACAVLMRGTL LLPDYLERLQ NGHRDIPIVL
LPLLNEIRAA RGESRLNENV LFAFDPEVRN ATEVELDHAR SSLTGCNRQL LDTAASAVKE
ELLRVKEALD LYLRIGGDVT DLRTQITVLS SVADTLAMMG LGMAGSLVLQ QRDALLRIVE
SDEKADEALL LEIAGALLHV DASLDNQVAN LGAETDADVV LANAETRRTL DVLAHEAISN
FTAARECFIA FIESNWDQAR LLKVPGLLSE VGGALSILEL SQAASYLEGV RRYIECELIT
KRRVPAARQL DTLADAMASL EYYLEALRER RPGREDILEI TRNSLEALSY WPIPAEEGDS
VGSQQSTDVL TLSAVATESM SPNEALPELT VVEDGTVTFQ EAVSELLTLV EPESADIFDA
SLGEPMQPIV TDLYEGDRRS ELPTESMPDD ETVIQSIPTV VAPLSSGGFE DDVGVIIDSD
IRDVFLEELD EEQGNLRRLL TIWGTAPDDM DSLRQIRRVF HTLKGSGRLV GALTLGHFAW
KIENLINRVL DGSRAASPAV VALVERACEV VLPEMNAALR GKASISTDLE ATQALIDLVA
SGEEAFYTSP DSIADDSATL KLVPQLIEGG APFFVDSVLR EILEAEIANH LDTIKDWLNT
AAGQSYSVNE SLLRAVHTLN GAFAMTKMPE ITQVMQSAET YIKRLLTKHQ KASVEGVGVL
SAMATAIADT LTALRSDSPR IPSFVSLVSC LSELVTTMPD GGQSQQQYFE SVAEQNLESV
PEQTQDVSLS NDVLTDVYDL SVNLDVLEPL SAVVEPEKHI VDRPQHEVAH QYNNVAASTM
SDVVAADSNL DVAAHQYDLV SGNESPADEL GLLAFDEPAF ELVDLFVEES SDLLDHCDNL
LAKLHEAPQD RELLVGLQRD LHTLKGGARM AGINAIGDLG HSIESMLESV MADYIMLNRD
DMRLLEYSFD YLHQMLTQTR QHRVVTMPSD LVATLKARTQ GATHDGMSNF GEVAELSLIA
DVSSNTLLDK ESQVLPDTPA ILPPLSLPIP LEGQDEDSSL ERLVQEQVRV RADLLDRLVN
HAGEVAIYRS QLEQRLSAFR NAMSELGRTN TRLRDQLRRL DLETEAQIVA RYQHEKSLVS
RDFDPLELDR FSTLQQLSRA LNESAADLTG LQGVLDELAR QYDGLLQQQF RVSSELQDGL
MRARMVPFNS ILPRLRRVVR QAEADTNKHV HLVLEGTHGE LDRNVIDRMV APLEHMLRNA
VAHGLEMPEK RRAAGKADEG KITIQLQREG SEILLKVSDD GAGLDRDAIQ RRAKQRGLIP
IDVNLSDAEL DGIIFTSGFT TYDEVNQLAG RGVGMDVVRS EVSQLGGSVS INSVRGHGVT
FTLRLPQTLA VTQAVFIRIG QSTFAVPVAS VIGIGRIAHE RYKSDHESYH YDGEQYVLYD
LGFLIGQPGI HADRQQVPLL LVRTGDLRVA VAVDEVLGNR EIVVKPVGLQ IASVPGIYGA
TITGDGCVIV ILDLAPLVRR YLNQPIHLEV EEAPVTQSQM PLVMVVDDSL TMRKVTSRVL
ERHNFSVSVA RDGIEALELL EERIPDLMLL DIEMPRMDGY ELVAAMRADD RFKSIPILMI
TSRSGDKHRQ RAFEIGVQRY LGKPYQEFDL MKNVYDLLGV VRVRE