| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0827 |
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| Symbol | |
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| ID | 6203414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 973100 |
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| End bp | 976267 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641702359 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001829539 |
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| Protein GI | 182681379 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAT TTTTCATTGA GCACCCAATC TTTGCCTGGG TGGTGGCGAT CCTGATCTCA
CTTGCGGGTG TGATCTCGAT CTTCAACCTT GGCGTCGAAT CTTACCCGAG CATCGCTCCA
CCCCAAGTGA CCATCACTGC CCATTATCCT GGTGCAAGTG CAGACACACT TGAAAAGTCA
GTCACTCAAG TGATCGAACA GCAACTGACC GGCATTGATC ACCTGCTGTA CTTCAGTTCC
AGCTCAGCCT CCAACGGGCA AGCCACAATC ACCCTCACTT TTGAAAGCGG CACCAACCCG
GATATTGCCC AAGTACAGGT CCAAAATAAG GTATCGCTAG CCACTCCCCG CCTTCCCAGT
GAGGTGACCC AGCAAGGTGT GGTGGTGGCT AAAGCTAACG CCGGCTTCCT GATGGTGGCC
GCACTACGCT CAGATAACCC TGCATTCGAC AAAGACGCAT TGAACGACTT TGTCGGCACA
CACGTGCTTG AGCAAATCTC GCGAGTGCCT GGTGTCGGCA GCACCAATCA GTTCGGTGCA
CAGTACGCAA TGAATATCTG GCTGAATCCA GAAAAGCTGC AGGGCTACCA CCTGTCGGCA
AGCCAGGTGT ACAACGCAAT CAGTACCCAG AATGTGCAAT TTGCTGCTGG TTCAATCGGC
GCTGATCCGG CACCGGCCAA TCAGAGCTTC ACCACAACGG TCACCACAAA AGGCCGCTTC
ACCACGCCTG AGCAATTCGA AAACATCATC CTACGTACTA ATAATGACGG CAGCACAGTA
CGGCTGAAAG ACGTGGCGCG CGTCAAGATA GGCGCAGAGA GTTATGGCAT TGACTCTCAG
TACAACGGTA AACCCGCTGG TGCCTTTGGT GTACAACTGC TGCCTGGTGC CAACGCGTTA
CAGGTTGTTG AAAGCATACA TACCAAAATG GACGAGCTGC AAAGCACGTT TCCGCAAGGC
GTCACTTGGT TCACTCCTTA TGAAAGCACC ACTTTTATCA AGATATCGAT CAAGGAAGTG
GTGAAAACGC TGGCCGAAGC GATTGTCTTG GTCTTCCTTG TGATGCTGAT CTTTCTGCAG
AACTTCCGTG CGACGATCAT CCCGACCTTG GTGATTCCGG TTGCCTTGCT CGGTACCTTT
GCAGGCATGT TAGCGATTGG ATTCACTATC AACCAACTCA CCTTATTTGC AATGGTGCTA
GCTATCGGCA TCGTAGTCGA TGATGCGATC GTGGTCATCG AAAATGTCGA GCGCATCATG
ACCGAAGAAC ATTTAGAACC TAAAGCCGCT ACGCAGAAAG CAATGACACA AATCACCGGA
GCGGTGATAG CCATCAGCAT CGTGTTGACA GCAGTATTTA TCCCTTCTGC GATGCAACCG
GGGGCCGCTG GAGCGATTTA CAAACAATTT GCACTGACAA TTGCGATGTC AATGGGTTTT
TCAGCATTCC TGGCGCTCAC CTTCACGCCC GCACTATGCG CGAGTTTCCT GAAATCTAGC
CACGGACAAA ATAAAAATTG GATCTTCCGT ACCTTTGAGA AGTACTACGA GAAACTCTCG
CACCGCTATG TCCGTCTCAT CAGCAACACA CTCAAGCGTA CTCCACGCTG GACAGCATTT
TTTGCGGTAC TCGTCGTCCT CTGTGGCTTT TTATTTACAC GGATGCCTTC AAGCTTCCTG
CCTGAGGAGG ACCAAGGCTT CGCGCTAGCG ATTGTGCAGC TTCCACCAGG CGCCACAAAA
ACGCGTACGA ACGAAGTATT CACTCAGATG CGCGCTGTAT TGGAGAAAAT ACCGTCCATC
GAAGGGCTCA TGCAAATCAC TGGCTTCAGT TTCGTTGGCT CAGGTGAAAA CGTTGGAATG
GGCTTCATCC GATTAAAACC CTGGCAGGAA CGTCAGGAGA CCGCCGATCA ACTGATTCAG
CAACTGAATG GTATGTTCTA CGGCATCAAG GGGGCGCAAA TCTTTGTGGT CAACCTTCCC
ACCGTACAGG GGCTTGGCCA GTTTGGTGGC TTCGATATGT GGCTGCAAGA CCGCAACGGC
CTTGGCCACG AAGCATTGAC TCAAGCACGT AATGTGGTGC TCGGCAAAGC GGCACAACGC
CAGGATGTGA TGGTTGCTGT GCGTCCGAAT GGGCTGGAAA ACTCTCCTCA GCTGCAATTG
ACTGTTGATC GTGTACAAGG AGAGTCGATG GGTCTGTCAA CCAGCGATAT CTACAAAGCA
ATCCAACTAA TGCTGGCTCC GACCTACGTA AACGACTATT TCTCTGAAGG TCGTATTAAA
CGCGTCAACA TGCGTGCCGA TGACATGTAC CGCACCAGTC CTGATTCACT ACGCAATTTC
TACACACCCA GCAGTTCTGC TACCGATGTC AATGGCCAAC CATTGATGAT TCCGCTCAGT
AACGTCGTAA AGGCCGATTG GATATACGCA GCACCATCGC TCGATCGTTA TAACGGTTAT
TCGGCAATCA ATATTGTTGG AAACACAGCC CCTGGTACAT CATCCGGACA AGCAATGAAG
GTGTTGGCAA GTATCGTTAA CGACGATCTG CCGCATGGGT TTGGCATTGA TTGGAGCGGG
ATGTCCTACC AAGAGATCAT CGCTGGCAAC GCAGCAACGT TACTACTGGT GCTGTCTGTT
GTCGTGGTGT TCCTATGCTT ATCAGCACTT TACGAAAGTT GGTCAATCCC CGTGGCTGTA
CTGCTGATCG TACCCATCGG TATACTCGGT ACAATCGTGT TCTCCATGCT TCGTGGCTTA
CCGAACGATC TGTACTTCAA AATCGGCCTG ATCACGGTCA TTGGTCTTGC TGCAAAAAAT
GCAATCCTGA TTGTGGAGTT CGCAGTTGCA CAACGCGCCA CTGGCAAGAC ACTGCGTGAG
GCGACCATTG ATGCAGCACG TTTACGCTTC CGCCCAATCC TGATGACATC CTTAGCGTTC
ATCCTGGGTG TGCTGCCGCT GGCAATCTCC TCGGGTGCTG GCGCTAACGC GCGACATTCA
ATTGGCACTG GGGTGATCGG GGGCATGACA TTCGCAACCA TCTTCGGAGT GATCTTTATC
CCACTGCTCT TTGTCGTGGT GCGACGCATC ATCGGCGATA AGCTTGATGA GCAATCCAAG
GAATACCTTG AAGCGCAATC AAGCAGTGGA CATCTTCAGA ATCGCTGA
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| Protein sequence | MPKFFIEHPI FAWVVAILIS LAGVISIFNL GVESYPSIAP PQVTITAHYP GASADTLEKS
VTQVIEQQLT GIDHLLYFSS SSASNGQATI TLTFESGTNP DIAQVQVQNK VSLATPRLPS
EVTQQGVVVA KANAGFLMVA ALRSDNPAFD KDALNDFVGT HVLEQISRVP GVGSTNQFGA
QYAMNIWLNP EKLQGYHLSA SQVYNAISTQ NVQFAAGSIG ADPAPANQSF TTTVTTKGRF
TTPEQFENII LRTNNDGSTV RLKDVARVKI GAESYGIDSQ YNGKPAGAFG VQLLPGANAL
QVVESIHTKM DELQSTFPQG VTWFTPYEST TFIKISIKEV VKTLAEAIVL VFLVMLIFLQ
NFRATIIPTL VIPVALLGTF AGMLAIGFTI NQLTLFAMVL AIGIVVDDAI VVIENVERIM
TEEHLEPKAA TQKAMTQITG AVIAISIVLT AVFIPSAMQP GAAGAIYKQF ALTIAMSMGF
SAFLALTFTP ALCASFLKSS HGQNKNWIFR TFEKYYEKLS HRYVRLISNT LKRTPRWTAF
FAVLVVLCGF LFTRMPSSFL PEEDQGFALA IVQLPPGATK TRTNEVFTQM RAVLEKIPSI
EGLMQITGFS FVGSGENVGM GFIRLKPWQE RQETADQLIQ QLNGMFYGIK GAQIFVVNLP
TVQGLGQFGG FDMWLQDRNG LGHEALTQAR NVVLGKAAQR QDVMVAVRPN GLENSPQLQL
TVDRVQGESM GLSTSDIYKA IQLMLAPTYV NDYFSEGRIK RVNMRADDMY RTSPDSLRNF
YTPSSSATDV NGQPLMIPLS NVVKADWIYA APSLDRYNGY SAINIVGNTA PGTSSGQAMK
VLASIVNDDL PHGFGIDWSG MSYQEIIAGN AATLLLVLSV VVVFLCLSAL YESWSIPVAV
LLIVPIGILG TIVFSMLRGL PNDLYFKIGL ITVIGLAAKN AILIVEFAVA QRATGKTLRE
ATIDAARLRF RPILMTSLAF ILGVLPLAIS SGAGANARHS IGTGVIGGMT FATIFGVIFI
PLLFVVVRRI IGDKLDEQSK EYLEAQSSSG HLQNR
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