Gene XfasM23_0706 details

Gene Information

• Locus tag: XfasM23_0706
• Symbol: lolA
• ID: 6202478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 834802
• End bp: 835446
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641702240
• Product: outer-membrane lipoprotein carrier protein
• Protein accession: YP_001829421
• Protein GI: 182681261
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein
• TIGRFAM ID: [TIGR00547] periplasmic chaperone LolA

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTGGA TGATGCTGAT GTTTTCTCGT TTTCGTTATA TTTTTTTTGC CGTCGCGTTG 
CTTTCGGGGC CTGTTTGTGC CGGTGCTCGC GCTGATTTGA GCGCCTTCAC TCGTGGATTG 
AAGACCTTAC AGGGGCACTT CTCGCAGGAA GTCATTGATA CTCAGGGTAG GGTGAAGGAG 
CGTTCCAACG GTACCGTTGC TTTGTCGTTA CCGAATTTGC TCCGTTGGGA ATGTGATGCG 
CCCTACAAGC AACTGGTTGT GGCCGATGGT AAGCGTGTGT GGCTGTTCGA TCCCGATTTG 
AACCAAGCTA GTGTGCTTCT TCAGGATAAT GAGGAGCGCA ATAGTCCGCT GATCGCGTTG 
ATTGATCCTA TTCAACTGGA TCGCAAGTAC GATGTGAGCG AGGAGGTTGC CATGCGTGAT 
GGTTTGCGAT GGTTGTCGTT GAGACCTAGG GGGAGTACCG AGGCCAGCTT CCAGAGTGCT 
TCTTTTGGTT TTTCTCAGAC TCAGTTGGCG AGAATGGAGC TTGTAGACAA TCTTGGGCAG 
CGTACAGTGA TTGCGTTCAG TGGTTGGCAG CGTAATCCTG TGTTTGCTGT TAATACCTTT 
CGTTTCACAC CAGGTAAGAA TGTCGATGTG ATCGGTGATC GGTGA 

 

Protein sequence

MIWMMLMFSR FRYIFFAVAL LSGPVCAGAR ADLSAFTRGL KTLQGHFSQE VIDTQGRVKE 
RSNGTVALSL PNLLRWECDA PYKQLVVADG KRVWLFDPDL NQASVLLQDN EERNSPLIAL 
IDPIQLDRKY DVSEEVAMRD GLRWLSLRPR GSTEASFQSA SFGFSQTQLA RMELVDNLGQ 
RTVIAFSGWQ RNPVFAVNTF RFTPGKNVDV IGDR