| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0684 |
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| Symbol | xerD |
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| ID | 6203020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 809292 |
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| End bp | 810266 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641702218 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001829399 |
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| Protein GI | 182681239 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.631001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCTCC GCACCACCAA CCAACGCCGC CAACTGGCCA GACAACAACC TCCCCTATTA
CCCGAAGATG CAACAACCAT TGCACACTGC CTTGATGCAC TCTGGATCAA ACACGGACTA
TCACGGCACA CCCTCAACAG CTACCGACGC GACCTGGAAG GCCTGGCCCG CTGGAACAAC
GGCCGTGCCG GACCTCTAGC GACCTTAACG CCACCTGCCC TGCTCGATTA CCTCACCTGG
CGCACCCAAC AACACTATTC CCCACTGAGC AATGCACGCT TACGGTCCGT ACTGCGTACC
TTCTTTTCCT ATGCCGTCGA ATGCGGCTGG CGCAACGACA ACCCAAGCAC CCTGCTAGCC
CACCCAGTCT TACCCCATCC ATTACCGAAA GCACTCACCG AAAGTCAGAT AGAAGCACTC
TTAGCCGCAC CATCAATAGA AACCCCAGAA GGACTACGTA ACCGAGCCAT GCTGGAATTG
ATGTATGCCG CCGGCCTGCG CGTCAGTGAA TTGGTCACCC TCCCCGTGGC GATGCTGAAC
CAACGTCAAG GCGTCCTACG CATCACCGGC AAAGGAGGTA AAGAACGACT CGTCCCACTC
GGCGAAGAAT CCCAACACTG GCTACAACGC TATTTAGAAC AGGCACGGCC ATCCCTGGCG
GCCGACAAAC CCATTCCCGC CGACTCGGAC GGAGACGTCC CCTTGTTCAT CAACACAAAC
CTGAAACGTC TCAGCCGCCA ACAATTTTGG AGATGGATCA AACACTATGC CGCCTTGGTC
GGCATCGCCC CAAACAAAGT CAGCCCCCAT GTCCTGCGTC ACAGCTTTGC AACACATTTA
CTGAACCACG GCGCAGACCT GCGTGCATTG CAAATGTTGC TGGGCCATCG CTCCATCTCG
ACGACACAGA TCTACACACT CATCGCACGC CAGCACTTAC AACAATTGCA CGCCCAACAC
CACCCCCGTG GTTGA
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| Protein sequence | MTLRTTNQRR QLARQQPPLL PEDATTIAHC LDALWIKHGL SRHTLNSYRR DLEGLARWNN
GRAGPLATLT PPALLDYLTW RTQQHYSPLS NARLRSVLRT FFSYAVECGW RNDNPSTLLA
HPVLPHPLPK ALTESQIEAL LAAPSIETPE GLRNRAMLEL MYAAGLRVSE LVTLPVAMLN
QRQGVLRITG KGGKERLVPL GEESQHWLQR YLEQARPSLA ADKPIPADSD GDVPLFINTN
LKRLSRQQFW RWIKHYAALV GIAPNKVSPH VLRHSFATHL LNHGADLRAL QMLLGHRSIS
TTQIYTLIAR QHLQQLHAQH HPRG
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