Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0579 |
Symbol | |
ID | 6202097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 687988 |
End bp | 689178 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641702116 |
Product | hypothetical protein |
Protein accession | YP_001829297 |
Protein GI | 182681137 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0199346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTATGTCG CCTCTGACGT GAAGATCGAC CTTCGTACTT CACGCGGAAC CGGTTATGCT TACACGCTTA TTATGCCGAA AAAGACCGTT ACTGCACCGC ACATTGAACA AGACGCCCAA GACCGTGGCC AGATACACCT GAGCGGCAGC TGGGTGTTAG CTAACTTATT AACGGCATCC GAATTACTTC AGTCATATAG CAACTCCATC CAGCACATCA ACGCACGCAA TATCGACCAA CTCGATTCGG CCGGCGCATT ACAGCTGCTG CGTTTCACCA CACGTACAGG ACTGAAAAAC GAAGCAATCG AATTTCGGGA AGAACACCGC CCCTTGATCT CCACAATTGA GATTCTCGAC GATGAGCATC CCAAACCTGA ACGTGACTAC GGTTTTCTTG CAGCACTGGA ACGCCTAGGC ATCGCGGTTG TCAAAACCCG CCGCAATATT ATCGACGTAT GCAGCTTCCT CGGCGAGAAC TTAGTGAAGA TAGCCCAACT GGCTCGCGAA CCACGGCGGT TCCGCATCAC CTCAACCGTG CACCACATGG AGCAAGTCGG TTTGGATGCG GTGCCTCTGG TGGTGGTGCT GTCGTATTTG GTAGGCGCTG TAATTGCATT CCTAGGTTCG ACCATCTTGC GCAACTTTGG CGCAGAAATC TTCGTCGTCG AATTAGTCAA CATTGCCTTC CTGCGTGAGT TCGCAGTGCT GTTGACCGCA ATTGTCCTGG CCGGTCGTAC CGCCAGCGCG TTCACAGCAC AAATCGGTGC GATGAAGTCG CGCGAAGAAA TCGACGCAAT CCAAACTTTA GGCCTAGACC CGATCGACCT GCTAGTCATC CCACGTCTTA TCGCACTGCT AGTCATGCTC CCACTATTGA CCTTCATCGC AATGATCGCC GGCTTAGCTG GAGGAATTAC GGTTGGCGCA TTTGACCTAG GCATCCCTCC GCAAATGTAC TTGTCACGCA TGCACGAAAC CATGCAATTG CGGCACTTCA TAATAGGGAT GTCCAAAGCA CCACTGTTTG CACTGATTAT TGGATTGATC GGCTGTCTGG AGGGACTCAA AGTCACCGGC ACCGCACAAT CCGTCGGCAA ACATACCACC TCCAGTGTTG TACAAACGAT CTCGCTAGTC ATCATCATTG ATGCCTTAGC AGCACTGTGG TTCATGCGTA TGGGTTGGTG A
|
Protein sequence | MYVASDVKID LRTSRGTGYA YTLIMPKKTV TAPHIEQDAQ DRGQIHLSGS WVLANLLTAS ELLQSYSNSI QHINARNIDQ LDSAGALQLL RFTTRTGLKN EAIEFREEHR PLISTIEILD DEHPKPERDY GFLAALERLG IAVVKTRRNI IDVCSFLGEN LVKIAQLARE PRRFRITSTV HHMEQVGLDA VPLVVVLSYL VGAVIAFLGS TILRNFGAEI FVVELVNIAF LREFAVLLTA IVLAGRTASA FTAQIGAMKS REEIDAIQTL GLDPIDLLVI PRLIALLVML PLLTFIAMIA GLAGGITVGA FDLGIPPQMY LSRMHETMQL RHFIIGMSKA PLFALIIGLI GCLEGLKVTG TAQSVGKHTT SSVVQTISLV IIIDALAALW FMRMGW
|
| |