| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0475 |
|---|
| Symbol | nrdF |
|---|
| ID | 6203068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 578310 |
|---|
| End bp | 579359 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641702013 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit beta |
|---|
| Protein accession | YP_001829196 |
|---|
| Protein GI | 182681036 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACA TGGCTATCTC ACTAGATCGC ATCAAGATTT TGGAACCCCG TAATCCTAAT
CGTTCCACAG GGATTATTAA CGGGAAAACC AGCGGCATTC TGAATTGGAA CGACATTCCT
TACCCATCCT TCTATCGGGC GTACAAGGAA TTGTCGACCA ACTTTTGGAT CCCGGACGAG
GTTGATATGA AGATCGACAA GCGCCAATAC GGTGAACTGT CGGCACGCGA GAAAAACGCT
TATGACGCCA TCATCGGTTT GCTAGCTACA TTGGATTCAC CGCAGACACG CTTCATCTAC
AACGTTGCTG AGTACATCAC TGATCCGGCG GCACATGCCA ATGCTGCGAT TATTGGTCAG
CAAGAGGTGA TTCACAACGA GAGCTACAGC TATGTGTTGG CTTCCATCAC TGACTTGGCC
AACCAAAACC GTGTGTTTGA GATCGCTCGG ACCCATCCCA CCATTCTCAA GCGCAATGCC
CCAATCATGC AGGCCTATGA CGATTTTATG CGTGAGAAAA CTGCTGAGAC TTTGCTGTAT
TCGCTGATTC AATCCTCGAT TCTTGAGGGT ATTAATTTTT ATTCTGGCTT TGCCTATTTC
TACAACTTGG TGCGGCAGAA CCGCATGACT GGCACTGGCA AAATCATCAG CTTTATCAAC
CGCGATGAAT TGGCTCATAC CAAATTCATC AGCGAAGTGA TTCGTGCCAT TGTTGGTGAG
AATCCGGAAT TGCAAACCGA TGCATTGACC GATTACGTGC ATCAAGCATT TGCCCATGCG
ATTGAGCTAG AAACACAGTG GACTGGTGAG GTACTTGATG GCATTGACGG TATTGACGTA
GAGGAGATGA TCCGCTACGT GAAGTACCGC GCTAATAAAA TGGCTGGCAT GCTTGGTATC
CAGACGCTGT ACACCGAGAC TACTGATAAC GTCATGCCCT GGATCAGGGC TTATGCAGAC
AATTTTACCG AGACAAAAAC GGATTTCTTT GAGATGCGTA ATGCCAGCTA TAAGAAGACC
AATGTAGACA ACTGCTTTGA CGACTTATAG
|
|---|
| Protein sequence | MTNMAISLDR IKILEPRNPN RSTGIINGKT SGILNWNDIP YPSFYRAYKE LSTNFWIPDE
VDMKIDKRQY GELSAREKNA YDAIIGLLAT LDSPQTRFIY NVAEYITDPA AHANAAIIGQ
QEVIHNESYS YVLASITDLA NQNRVFEIAR THPTILKRNA PIMQAYDDFM REKTAETLLY
SLIQSSILEG INFYSGFAYF YNLVRQNRMT GTGKIISFIN RDELAHTKFI SEVIRAIVGE
NPELQTDALT DYVHQAFAHA IELETQWTGE VLDGIDGIDV EEMIRYVKYR ANKMAGMLGI
QTLYTETTDN VMPWIRAYAD NFTETKTDFF EMRNASYKKT NVDNCFDDL
|
|---|
| |