Gene XfasM23_0448 details

Gene Information

• Locus tag: XfasM23_0448
• Symbol: rplF
• ID: 6203203
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 543655
• End bp: 544182
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641701982
• Product: 50S ribosomal protein L6
• Protein accession: YP_001829169
• Protein GI: 182681009
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.935491
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGAG TAGCTAAGAA GCCCATTTCT ATTCCGAAGG GTGTAGAAGT CAGTGTTCAG 
TCTGACATGC TAACTGTTAA GGGAGTGAAA GGTGTTTTAA CTTTTCCTAA GTCCGATAAT 
GTAAATGTTG TTATGGATGG CGATATCCTT ACATTGTCGG CTAATGATCA TTCTCATGTT 
TCTTTGGCTG GTACGGTCCG TGCTATTTTG TCAAATATGA TTAAGGGTGT TTCTATAGGC 
TTTGAGCGTA AACTTGAATT GGTTGGTGTG GGTTATCGTG CTTCAATGCA AGGCAAAGAT 
TTGAATCTTT CTCTTGGTTT TTCGCATCCA TTGTTGTTTG TTCCCCCTGA AGGCATAAAT 
TTGTTGACTC CTAGTCAAAC TGAAGTTGTG GTGCAGGGGA TAGATAAACA GCGTGTTGGT 
GAAGTTGCTG CTAAGATTCG TAATTTTCGG CCGCCTGAGC CCTATAAAGG AAAAGGCTTG 
AAGTATGCTA CTGAGGCTAT CATGCGTAAA GAAGCTAAGA AAGCGTGA 

 

Protein sequence

MSRVAKKPIS IPKGVEVSVQ SDMLTVKGVK GVLTFPKSDN VNVVMDGDIL TLSANDHSHV 
SLAGTVRAIL SNMIKGVSIG FERKLELVGV GYRASMQGKD LNLSLGFSHP LLFVPPEGIN 
LLTPSQTEVV VQGIDKQRVG EVAAKIRNFR PPEPYKGKGL KYATEAIMRK EAKKA