| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0433 |
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| Symbol | rplC |
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| ID | 6203070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 536854 |
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| End bp | 537486 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641701967 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001829154 |
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| Protein GI | 182680994 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000241052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTTTTG TGGGCCGTAA GGCTGGTATG AGTAGGGTAT TCCTTGAAGA TGGTTGTTCG
ATACCTGTTA CTCTCATAGA GGCGACTGCG AATCGTGTCG TGCAAATAAA AACTTCCGAT
GTTGACGGCT ATGATGCTGT TCAGGTGACA GTTGGTTCGC GTCGTTCTGT TCTTGTGAAT
AAGCCTGAGT CTGGTCATTT TGCTAAAGCA AAGGTTGAGG CAGGTCGTGG GTTGTGGGAG
TTTCGCGTCG AAAAAACTCA GCTTGGTAGT TATAGTGTCG GTTCTGAGGT CGGATTAAGT
ATTTTTGCTG TTGGTCAGAA AGTCGATATT CAGGGTATAA CCAAGGGTAA GGGGTTTCAA
GGTACTATTA AACGCCATAA TTTTAGGATG GGTGATGCTA CTCATGGTAA CTCTTTGTCG
CATCGTGCGC CGGGTTCCTT GGGGCAGCGA CAGACACCTG GGCGTGTGTT TCCGGGAAAA
AAGATGTCTG GTCATATGGG CGCTGTGAAG CAGAGCGTCC AGAATCTTGA AGTGATTAAG
ATTGATGTTG AACGTTGCTT GATTGCTGTT CGCGGCGCTA TTCCTGGCGC TTCAGGAGGT
GATGTCCTCA TTCGTTCGGC TAGTAAGATA TAG
|
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| Protein sequence | MGFVGRKAGM SRVFLEDGCS IPVTLIEATA NRVVQIKTSD VDGYDAVQVT VGSRRSVLVN
KPESGHFAKA KVEAGRGLWE FRVEKTQLGS YSVGSEVGLS IFAVGQKVDI QGITKGKGFQ
GTIKRHNFRM GDATHGNSLS HRAPGSLGQR QTPGRVFPGK KMSGHMGAVK QSVQNLEVIK
IDVERCLIAV RGAIPGASGG DVLIRSASKI
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