Gene XfasM23_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0376 
Symbol 
ID6202365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp466445 
End bp467464 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content53% 
IMG OID641701910 
Productintegrase family protein 
Protein accessionYP_001829098 
Protein GI182680938 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGTA AGCCAATCAA AGCAGGCGCG ATTCCGAGGT TTCGCGTGCG CCCTCAGAAG 
TCCGGCGTGG TGTATTACTA CTACGATCAT GGCGGCAAGC CACGCAAAGA GACGCCACTA
GGACGCGACT ACGGGTTAGC CATCAAGCGG TGGGCTGAGC TGGAGCATGC GCAGATCACT
CCTGCGATTG CGGTGACGTT CCGCCATGTG GCCGAGCGTT ACCGCGCTGA GGTGATCCCA
ACAAAGGCGT ATAACACCCA ACGCATGCAC CACGTATATT TAAACTATCT GTTGCAGTTT
TTCGACGATC CCCCCGCGCC GTTTGAGTCA ATTAAACCTG TGAATATCCG CCAGTATCTA
GATTGGCGGC CTTTTAAGGT AAGCGCTAAT CGCGAAGTAG CATTATTTTC GCATCTTTGG
AATTGGGCGC GGAGTAAGGG AATTACTGAT CTTCCTAACC CTTGTGGGGG TATCCGGCGT
AATAAGGAGC GGGGGCGCGA CGTGTATATA GATGATACGA CGTACCGCGC TGTGTACCAG
GCAGCGGACC AAACGCTCAG GGATGCGATG GACCTCGCCT ATCTGACGGG GCAGCGTGTG
AGTGATGTTG TGTCTATGGA TGAGCGCCAT ATTGTTAATG GCGCTTTGGA GATTTGCCAA
GCTAAAACGG GAGTGAAATT GGCGATTGCG ATTACGGGTG AATTGGCAGT TTTAATAAAG
CGTATTTTTG ATCGCAAGCG GGGGATGAAG CTGCGTAGTA CACGTTTGAT TGTGGATGAA
AAAGGCTTGG GGTTGAATTG GAAAAAATTA GCTTACAGGT TTAGGAAAGT ACGCGCTGCC
GCAGGGATCG CCAAGGAGGT ATTTCAATTC CGCGATCTAC GCGCCAAAGC GGCGACCGAT
AAGGCAGATT TGGCGGGCGA TATGCGCCAA GCACAAGCAC AATTGGGGCA TGCGTCGGTG
ACGATGACGG AACACTATGT ACGCAAGCGC AAAGGGGCGA AGGTGACGCC GACGCGGTGA
 
Protein sequence
MGRKPIKAGA IPRFRVRPQK SGVVYYYYDH GGKPRKETPL GRDYGLAIKR WAELEHAQIT 
PAIAVTFRHV AERYRAEVIP TKAYNTQRMH HVYLNYLLQF FDDPPAPFES IKPVNIRQYL
DWRPFKVSAN REVALFSHLW NWARSKGITD LPNPCGGIRR NKERGRDVYI DDTTYRAVYQ
AADQTLRDAM DLAYLTGQRV SDVVSMDERH IVNGALEICQ AKTGVKLAIA ITGELAVLIK
RIFDRKRGMK LRSTRLIVDE KGLGLNWKKL AYRFRKVRAA AGIAKEVFQF RDLRAKAATD
KADLAGDMRQ AQAQLGHASV TMTEHYVRKR KGAKVTPTR