Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0321 |
Symbol | lpxD |
ID | 6201879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 416539 |
End bp | 417555 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641701852 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001829043 |
Protein GI | 182680883 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATCT TTACTGCTCA AGAGCTCGCC GAACGCTTTA ACCTGCAACT GTTTGGGGAC GGCAACATCC GTATCCACGG TGTCGCCACA CTCACACAAG CAAGTCCGGA ACAACTTAGC TTCCTCGCTA ATCCACGCTA CCTCACACAG CTACCCAATA GTCGCGCGGG CGTCATTGTG CTGCATGCCG ACGATGTCAA AGCAGCCTCT GGTGCAGTAC TGATCGCCAA AGACCCTTAC GTCACTTTCG CCAAGATCGC CACACTATTC GACATAAAAC CAGCGCGTGA AGCAGGCATC CATCCTCTAG CAACCGTCGA TCCAAGCGCG CATGTCTCAC CAACCGCGCA TGTCGGCGCA TTTGTCAGCA TTGGCGCACG CAGCAGCATC GGCGCAAGCT GCATCATAGG AACCGGTAGT ATCATCGGCG ATGATTGCAC CATTGATGAC GGCAGTGAAC TCATTGCACG TGTCACGTTG ATCTCCAGAG TACGCTTGGG TAAACGGGTA CGCATTCACC CTGGTGCAGT GCTGGGTGGT GAAGGCTTCG GACTTGCAAT GGAAAGCGGA CACTGGATCA AAATACCGCA GTTAGGTGGC GTTGTGATCG GCGATGATTG CGAGATAGGC GCCAACAGCT GCATCGACCG CGGTGCACTT GACGACACTG TATTGGAAGA GGATGTGCAT ATCGACAATT TAGTGCAAAT CGCACACAAC TGCCGGATTG GAGCACATAC CGCAATCGCC GGCTGTACAG GCATTGCTGG TAGCGCGAAA ATTGGCCGCT ACTGTCTGCT TGGCGGCCAC GTTGGCGTCG TTGGTCACCT CCAGATCTGT GACAACGTCG TGATCACCGG CAAATCGGTC GTACGTAACT CAATTCACAC CCCCGGCGAG TACTCATCAG GTACTCCATT GACCGACAAT CGTACTTGGC GCAAAAACGC TGTACGGTTT AAACAGCTGG ATATGCTGGT GCGCCGCATG ATGGCCGTCA GTAAGGAGAA AGCATGA
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Protein sequence | MPIFTAQELA ERFNLQLFGD GNIRIHGVAT LTQASPEQLS FLANPRYLTQ LPNSRAGVIV LHADDVKAAS GAVLIAKDPY VTFAKIATLF DIKPAREAGI HPLATVDPSA HVSPTAHVGA FVSIGARSSI GASCIIGTGS IIGDDCTIDD GSELIARVTL ISRVRLGKRV RIHPGAVLGG EGFGLAMESG HWIKIPQLGG VVIGDDCEIG ANSCIDRGAL DDTVLEEDVH IDNLVQIAHN CRIGAHTAIA GCTGIAGSAK IGRYCLLGGH VGVVGHLQIC DNVVITGKSV VRNSIHTPGE YSSGTPLTDN RTWRKNAVRF KQLDMLVRRM MAVSKEKA
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