| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0282 |
|---|
| Symbol | |
|---|
| ID | 6203860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 365924 |
|---|
| End bp | 366400 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641701814 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001829005 |
|---|
| Protein GI | 182680845 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3134] Predicted outer membrane lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTT GGGCAGCCCA TCCACGGAAG GCTGATCTGA AAAATGTGGG GATCGTCGGC
AACGTCAAAT TTGATTACGC CCAGGTGATG AAGGTCGCGC CTGTCTATCA GACTTGGCAT
GCCAGCCATG TTGAGGAACA GTGCGATCCC TTGCCACTTA CTGAGGTTGC CCCCGAATTG
GACCCGGGTC ATGACAAACA TCGCAAAATC TCGCGGGTCA TGGAGTTGGT AAAAGGTTTT
TTTTCCAATC ACCGCACAGA ACAAGCACTG CCTGGCGCTT CAACCAATTC CCAGCGTAAC
TGCCGTATCG TTGAGGTGCC GCGTCAATTT CGCCGTCCGA TTGCCTATGA CGTTGACTAC
ATTTACAAGG GCACCAAATA TCGTTCGCGA CTGCCTGAGG ATCCAGGTAA CCGCTTACCG
GTGCGTGTCC TGGTGACACC TTACCTCTCC GAACACAACT TCCCCCCGCC CCGTTGA
|
|---|
| Protein sequence | MPSWAAHPRK ADLKNVGIVG NVKFDYAQVM KVAPVYQTWH ASHVEEQCDP LPLTEVAPEL
DPGHDKHRKI SRVMELVKGF FSNHRTEQAL PGASTNSQRN CRIVEVPRQF RRPIAYDVDY
IYKGTKYRSR LPEDPGNRLP VRVLVTPYLS EHNFPPPR
|
|---|
| |