Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0238 |
Symbol | tpiA |
ID | 6202280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 316138 |
End bp | 316887 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641701771 |
Product | triosephosphate isomerase |
Protein accession | YP_001828963 |
Protein GI | 182680803 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCCCA AGATTGTGGC TGGGAATTGG AAGTTGCATG GTAGCCACGC GTTCGCACAG GCATTGGTTG CGCAGGTCGC TGCTGGTTTG CCGCTGCCTG GAGTCAGTGT GATTATCTTG CCGCCATTGC TGTATCTGAG TGATTTGGCG CAGCGCTTCA AAGGGGAAGG TTTGGCGTTT GGTGCGCAGA ACGTCAGTCA CCATGATAAA GGTGCTTACA CTGGGGAAGT TTCGGCGGCG ATGGTGGCTG ATGTCGGTGC TCATTACACT TTGGTTGGGC ATTCTGAACG TCGGGAGTAT CACCATGAGG ACAGTGAGTT GGTGGCGCGT AAATTTGCTG CTGCTCTGAG TGCTGGGTTG CGACCAATTC TATGTGTTGG GGAGAGTTTG CCCCAGCGTG AGGCTGGACA GGCAGAGGTT GCCATTGCGA TGCAGCTTGC GCCTGTGTTG GCTCTGGTTG GCCCGCAGGG TGTTGCCCGT GGCTTGATTG CCTATGAGCC GGTTTGGGCG ATTGGTACTG GCCGTCATGC GGATCCGAGC CAAGTTCAAG CGATGCACGC TTTTATTCGT GGTGAAATTG CGAGGCAAGA TGCTAGAATC GGCGATTCTC TGTTGATTCT ATACGGAGGC GGCATCAAGC CTTGCAATGC TGCTGAGTTG TTTTCCCAGC AGGATGTCGA TGGTGGGTTG ATTGGTGGTG CTTCGTTGGT TGCTGATGAT TTCTTGGCTA TCGCTCGTGC GACGGTTTAG
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Protein sequence | MRPKIVAGNW KLHGSHAFAQ ALVAQVAAGL PLPGVSVIIL PPLLYLSDLA QRFKGEGLAF GAQNVSHHDK GAYTGEVSAA MVADVGAHYT LVGHSERREY HHEDSELVAR KFAAALSAGL RPILCVGESL PQREAGQAEV AIAMQLAPVL ALVGPQGVAR GLIAYEPVWA IGTGRHADPS QVQAMHAFIR GEIARQDARI GDSLLILYGG GIKPCNAAEL FSQQDVDGGL IGGASLVADD FLAIARATV
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