Gene XfasM23_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0191 
Symbol 
ID6202176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp261227 
End bp263056 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content57% 
IMG OID641701729 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001828922 
Protein GI182680762 
COG category[K] Transcription
[J] Translation, ribosomal structure and biogenesis
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATC CATCTTCTAC ACCGCTGCTG TTTGCAGATC TCGGCCTCTC CGATGCTGTG 
ATGCAAGCCG TCACAAAAAT CGGCTACGAA ACTCCGTCGC CCATCCAGGC GGCGACCATC
CCAGCCTTGC TTGCTGGGCG CGATGTGCTG GGCCAAGCCC AGACCGGCAC TGGGAAGACT
GCCGCATTCG CGCTACCGTT GCTCACACGC ACCGTTCTGA ACCAGGTCAA GCCGCAAGTG
CTCGTACTGG CACCCACCCG CGAACTGGCT ATCCAAGTTG CCGAAGCATT CCAGCGCTAT
GCTGCCTCGA TCTCTGGCTT CCGTGTCCTA CCCGTGTACG GCGGCCAATC CTATGGCCAA
CAACTGGCCG CACTGAAACG CGGTGTCCAT GTGATCGTCG GTACCCCGGG CCGGGTGATT
GATCACCTAG AGCGCGGCAC CCTGGATCTA TCGGAATTAA AAACGCTGGT CCTCGACGAA
GCCGACGAAA TGCTGCGTAT GGGTTTCATT GAGGACGTTG AAGAAGTCCT ACGGAAGTTG
CCCGCTTCAC GCCAGGTCGC TCTGTTCTCG GCAACCATGC CACCACAGAT CCGCCGTATC
GCACAAACCT ATCTACAAGA TCCGATTGAA GTCACCATCG CCACCAAAAC CACGACCGCA
GCCAACATCC GCCAACGTTA CTGGTGGGTC AGCGGCCTCC ACAAGCTAGA TGCACTCACA
CGCATTCTTG AGGTGGAAAC CTTCGACGCA ATGATTATCT TCGTGCGCAC CAAAGCTGCC
ACCGAAGAAT TGGCCGAGAA ATTGCAGGCA CGTGGCCTGA CCGCCGCAGC GATCAATGGC
GATATGCAAC AAGCGCAACG CGAACGCACC ATTCACCAAC TCAAAGATGG CAAGCTGGAT
ATCCTCGTTG CCACCGACGT CGCCGCACGT GGTTTGGACG TAGAACGTAT CAGCCACGTG
CTGAACTACG ACATCCCTTA CGACGTTGAG AGCTACGTCC ACCGTATCGG ACGCACTGGG
CGTGCCGGTC GCAGCGGCGA AGCAATCCTC TTTGTGACTC CGCGCGAAAA AGGCATGCTG
CGCCAGATTG AACGTGCCAC TCACCAACCG ATCGAAGCCA TGCAACTGCC CAGTGTGGAT
GCAGTCAACG ACACGCGCGT GACCAAATTT TTCGGACGCA TCAGCAATGC TCTGGTGGTC
GGCGCTGAAA TCGACTTCTA CCGCAAACTG CTACAACGTT TCGAGAGCGA GCACAATGTC
CCTGCCATTG AGATCGCTGC TGCCCTGGCA CGACTCCTTC AGGGGGATAG CCCCTTCCTG
CTGAGTGTCC CGACGCGCCC CCAACGCGAG CGCAGCGAGC TGGCATCCGA GCATCATGTC
AAACGCCCCT CATCCTTCAA GCAGACAGAG CGTCCAAACA ACACTGAACA CCCCAAGCGC
CCCCAACGGA ACGCACCTGC CCGCAATGTC CCAGAGTTCG GTATGGAGTC TTACCGCATC
GAAGTCGGCC GCATGCACGG TGTGAAGCCA GCCAATATCG TCGGCGCTAT CGCCAACGAA
GCTGGATTAG AGAGCCGCTA CATTGGCCGG ATTGACATCC GTGACGATCA CTCGGTTCTG
GATCTCCCCG CAGAAATGCC ACACGAGATC CTGCAACACC TAAAAAAGGT CTGGGTATCA
GGACAGCAAC TACAAATGCG TCGGATCGAC ACAACCGAAA CAACCGCACC TGCACGGGAA
TTTAAGTCAA AACCGGGTGG CGCTGGCAAA TTCCCGCCGA AACCGCATCA CAACAAATCA
ACCAAACCAA AACCACCATA CAGCGGTTGA
 
Protein sequence
MSNPSSTPLL FADLGLSDAV MQAVTKIGYE TPSPIQAATI PALLAGRDVL GQAQTGTGKT 
AAFALPLLTR TVLNQVKPQV LVLAPTRELA IQVAEAFQRY AASISGFRVL PVYGGQSYGQ
QLAALKRGVH VIVGTPGRVI DHLERGTLDL SELKTLVLDE ADEMLRMGFI EDVEEVLRKL
PASRQVALFS ATMPPQIRRI AQTYLQDPIE VTIATKTTTA ANIRQRYWWV SGLHKLDALT
RILEVETFDA MIIFVRTKAA TEELAEKLQA RGLTAAAING DMQQAQRERT IHQLKDGKLD
ILVATDVAAR GLDVERISHV LNYDIPYDVE SYVHRIGRTG RAGRSGEAIL FVTPREKGML
RQIERATHQP IEAMQLPSVD AVNDTRVTKF FGRISNALVV GAEIDFYRKL LQRFESEHNV
PAIEIAAALA RLLQGDSPFL LSVPTRPQRE RSELASEHHV KRPSSFKQTE RPNNTEHPKR
PQRNAPARNV PEFGMESYRI EVGRMHGVKP ANIVGAIANE AGLESRYIGR IDIRDDHSVL
DLPAEMPHEI LQHLKKVWVS GQQLQMRRID TTETTAPARE FKSKPGGAGK FPPKPHHNKS
TKPKPPYSG