Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0153 |
Symbol | dnaE |
ID | 6203493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 208935 |
End bp | 212516 |
Gene Length | 3582 bp |
Protein Length | 1193 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641701688 |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_001828884 |
Protein GI | 182680724 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACGT CTTCATTTGT TCATCTCCAT ATTCACACTG AATTCTCGTT AGCGGATTCA ACGATTCGCG TGCCCGAGAA ACCAGAACAG GCTCACCCGA AAAAGGCCAA ACAAGCCAAC CTACTCAGCA GAGCCGTTGA ACTCGGACTG CCAGCGCTGG CAGTAACGGA TCTGAACAAC CTATTCGCAC TGATTAAGTT CTATAAGGCC GCTGAAACCG TCGGCATTAA GCCGATCAGC GGTGCTGATC TCCTCATCGC CGAACCAGAG CACCCCCCGT GGGGAATGAC ATTGCTGTGT CGGGATCACG CTGGCTACCT GAATCTATCG CAACTGATCA GCCGCGGTTG GCTGGAAGGT CACCGCCCTG AAGGAGGAGT GGCCGTGCAC CCGGACTGGG TCCGTGACCA CCACAAAAAT CTATTTGCCC TAATCGGACG TCACAGCCTG GCCGGACAGC TGTTGGCCAA AGGTCGCGCT GATTTGGCCG AACAGCAACT GGCGGACTGG CAACACGTAT TCGGTGACGG CTTGCACTTG GAACTCACGC GCACTGGACG CGATGGCGAA GAACCATTCA ATCAATTTGC CCTCCAAGTC GCTGGCATCC GCGGCATACC GGTGATTGCC AGCAACGACG TTCGCTTCCT GGTACAAAGC GACTTTCTGG CACACGAGGC GCGCGTCTGT ATCGCATCTG GACGCATGCT TGATGATCCC AAGCGACCAC GCACTTACAG CGAACAACAG TATCTGCGTT CCTCCGAAGA GATGGCAGCA CTCTTTGCTG ACATCCCAGA CGCCTTGGAC AACACCCGCA CCTTGGCACA ACGCTGCAAT ATCGAGATGC GGCTGGGGAC CTATTTCTTA CCTAACTACC CCGTTCCCAA CGACGAAACG TTGGACAGTT GGATCCGCAA ACAGTCGCAT GAAGGTCTGG AAGCACGCCT ACTGAAACAT CCATTAGCAC CAGGGCAGAC ACGTGAAGAC TACGTGACCC GTCTGGAATT TGAACTGGAC ACCATCATCA AGATGGGGTT CTCCGGTTAC TTCCTCATCG TGGCCGACTT CATTCAATGG GGTAAACAAC AGGGCATCCC CATCGGCCCG GGACGCGGGT CTGGTGCCGG CTCACTGGTC GCGTGGGCGT TACTGATTAC TGACCTGGAC CCTCTGCCAT ACAACTTGTT GTTTGAACGC TTTCTTAATC CCGAACGCGT ATCAATGCCG GATTTCGACA TCGACTTTTG TATGGAACGC CGTGATGAGG TCATTAGCTA CGTCGCACGC AAATACGGTC GCGAACGGGT CAGTCAAATC ATTACCTACG GCACCATGGC TGCGAAAGCA GTGGTGCGCG ACGTCGGTCG CGTATTGGGT TTCCCATATG GCTTGGTCGA CAGCGTCGCT AAGCTGATCC CGAGCACCCT TGGCATCACC CTGAAAGATG CGATGGGCGA AGGCGAGACC AACGACAACG CCTCAGCAGA ACTGATACAA CGCTATCAAG CCGAGGAGGA CGTACAGGAG CTGCTCAACC TGGCACGCCA ACTGGAAGAT CTGACCCGCA ATGCTGGCAA GCACGCTGGC GGTGTCGTGA TCGCACCGAA CCCACTCACT GAATTCTGCC CACTCTTTGC AGAACACGAC GAAAACGGAC GCGGGAAGAA CCCCGTCACC CAATTCGACA AAAACGACGT GGAAGAAGTC GGCTTAGTGA AATTCGACTT CCTCGGCCTA CGCACACTCA CCATCATTGA TTGGGCGGTC AAGGCAATCA ACAAACGCCA CGCCCGCGCC TGTATTGATC CGGTGGACAT CACCGCACTT CCACTGGACG ACATCCCAAC TTACAAAGAC GTTTTTGCAT CAGGGAACAC GAGCGCAGTA TTCCAATTTG AATCCTCGGG CATGCGCCGC CTCCTCAAAG ATGCACGCCC AGACCGCTTC GAAGATCTCA TCGCACTGGT GTCACTGTAT CGCCCAGGCC CTATGGACTT GATCCCTGAA TTCACCGCGC GCAAGCACGG AGTGCAAGAG ACCATCTATC CCGACCCGCG TACGAAGAAC ATTCTTAAAG ACACCTACGG GATCATGGTG TACCAGGAAC AAGTGATGCA AATGGCCCAG ATTGTCGGCG GTTACTCGCT GGGCAGCGCT GACCTGCTAC GTCGCGCGAT GGGTAAAAAA GTACCTGCCG AGATGGCCAA GCACCGCGAG ATCTTCCGCG AGGGTGCCGC CAAAGGTGGC ATGGACGCGG TCAAAGCCGA TGAAATCTTC GACCTCATGG AGAAATTTGC CGGCTATGGT TTTAATAAAT CCCACGCCGC TGCATACGCG CTGGTCAGTT ATCAAACCGC TTGGCTCAAG CGCCATTATC CTGCTGAATT CATGGCAGCC ACGCTGTCCT CGGACATGGA CAACACCGAC AAAGTCGTCG GCTTCCTCGA CGAGGCACGT AACCTCAATC TGAAGGTGCT GCGACCAAAC ATCAATCACT CAGCCTACAT GTTCGAGGCA ACTCACGCCG ACACAATCCA ATACGGCCTG GGCGCTATTA AAGGTGTCGG CCAAAGCGTC TGCGAGGCAA TCGTCAAAGA AAGGTTGCAC TACGGTCCGT ATACGTCACT GCTCGATTTC TGTACCCGGG TCACCTCAGC CAAACTCAAC CGACGTGCAC TCGAAGCAAT GATCCATGCT GGCGCACTGG ACGAGCTAGG TAAAAATCGC GCCTCTGTCA TGCTGCAACT GCCAGAAGTC ATCAAAGCAA CGGAACAAAT GTCCAGAGAA CGCGAGTCCG GGCAAAACTC GCTTTTCGGC AACGCAGACC CCGGCACACC AGTCATCCAA TTAGATCTTC CAGAATGCGA AGAATGGCCG CTAACACGCA TGTTGAACGG AGAGCGGGAG ACGCTGGGCC TTTATTTCAG CGGCCACCCA TTCGACCCAT ACCGTAAGCA AGTGAAGGAA CTTGTTGGTT GCGATCTAAA CACCAGTGCG CTTGAAAGAA TTCTGGGTTC CCAACAACGT GGCAACGGTG AAAAGCGTAC TTGGCAGCCA GAGGTGAACA CCATTCTCGC AGGATTGGTC GTCAGTGTGC GCCGTAAGGG AGACAGCCAA GTCTTTGTAC AACTTGAAGA CGGACGCGGT CGAATTGAAT GCAGTGCGTT CTCCGACGCC CTGGCAGAGT TCGGCCACCT GTTGACCCGT GACCGCATAC TGATTGTCAA AGGTGGTCTG CGAGAAGATG AATTCAACGG CGGCTACAGC CTACGGATCC GTCAATGCTG GGATTACGCG CAACTCTGTA CAGACTATGC GCAACGCTTG TTGCTACGCG TGGACCTACG CACCTCTCAC GCATGGGAAA GAATCGATGC CATCCTGGCA CGCTATCGCC CCGGCAACAC CCCATTACGT CTCGATCTGT TGCTGAATTC AACCCACGGC CCCGTCGCCG GCACGCTCGA CTTGAGTGGC GGCCAATCTG TACGTATCGA ACAATCACTC TTGGATAAAC TGCAAAAAGA TCCCGCGGTA TCTAAGCTTA AGGTCAAATA CACGCCACCT TGGGTGCAAT GA
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Protein sequence | MSTSSFVHLH IHTEFSLADS TIRVPEKPEQ AHPKKAKQAN LLSRAVELGL PALAVTDLNN LFALIKFYKA AETVGIKPIS GADLLIAEPE HPPWGMTLLC RDHAGYLNLS QLISRGWLEG HRPEGGVAVH PDWVRDHHKN LFALIGRHSL AGQLLAKGRA DLAEQQLADW QHVFGDGLHL ELTRTGRDGE EPFNQFALQV AGIRGIPVIA SNDVRFLVQS DFLAHEARVC IASGRMLDDP KRPRTYSEQQ YLRSSEEMAA LFADIPDALD NTRTLAQRCN IEMRLGTYFL PNYPVPNDET LDSWIRKQSH EGLEARLLKH PLAPGQTRED YVTRLEFELD TIIKMGFSGY FLIVADFIQW GKQQGIPIGP GRGSGAGSLV AWALLITDLD PLPYNLLFER FLNPERVSMP DFDIDFCMER RDEVISYVAR KYGRERVSQI ITYGTMAAKA VVRDVGRVLG FPYGLVDSVA KLIPSTLGIT LKDAMGEGET NDNASAELIQ RYQAEEDVQE LLNLARQLED LTRNAGKHAG GVVIAPNPLT EFCPLFAEHD ENGRGKNPVT QFDKNDVEEV GLVKFDFLGL RTLTIIDWAV KAINKRHARA CIDPVDITAL PLDDIPTYKD VFASGNTSAV FQFESSGMRR LLKDARPDRF EDLIALVSLY RPGPMDLIPE FTARKHGVQE TIYPDPRTKN ILKDTYGIMV YQEQVMQMAQ IVGGYSLGSA DLLRRAMGKK VPAEMAKHRE IFREGAAKGG MDAVKADEIF DLMEKFAGYG FNKSHAAAYA LVSYQTAWLK RHYPAEFMAA TLSSDMDNTD KVVGFLDEAR NLNLKVLRPN INHSAYMFEA THADTIQYGL GAIKGVGQSV CEAIVKERLH YGPYTSLLDF CTRVTSAKLN RRALEAMIHA GALDELGKNR ASVMLQLPEV IKATEQMSRE RESGQNSLFG NADPGTPVIQ LDLPECEEWP LTRMLNGERE TLGLYFSGHP FDPYRKQVKE LVGCDLNTSA LERILGSQQR GNGEKRTWQP EVNTILAGLV VSVRRKGDSQ VFVQLEDGRG RIECSAFSDA LAEFGHLLTR DRILIVKGGL REDEFNGGYS LRIRQCWDYA QLCTDYAQRL LLRVDLRTSH AWERIDAILA RYRPGNTPLR LDLLLNSTHG PVAGTLDLSG GQSVRIEQSL LDKLQKDPAV SKLKVKYTPP WVQ
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