Gene XfasM23_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0094 
SymbolvalS 
ID6203001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp130527 
End bp133511 
Gene Length2985 bp 
Protein Length994 aa 
Translation table11 
GC content59% 
IMG OID641701624 
Productvalyl-tRNA synthetase 
Protein accessionYP_001828825 
Protein GI182680665 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID[TIGR00422] valyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAGT TCACCTCCAG CTATGACCCC ACCTCTTTTG AAGCGCGCTT ATACGCCGAG 
TGGGAAGCTG CAGGCCACTT CAAACCCTCC GGCGTAGGTC AGCCCTATAC CATCCTGCTA
CCACCGCCGA ATGTCACCGG CACCCTGCAT ATGGGCCATG CCTTCCAACA AACCTTGATG
GATGCGCTGG TGCGCTATCA CCGCATGTGT GGAGATGACA CCCTATGGCA AGTGGGCACC
GACCACGCCG GTATCGCCAC CGAAATGGTG GTCAGCCGCA ATATGGCACT CGAAGGCCGC
GGAGAAACCC GCGACTCGCT GGGCCGTGAA GGCTTTATCA ACAAAGTGTG GGAGTGGAAA
CAGCAATCCG GCGACACCAT CGAACGGCAA ATGCGCCGCC TCGGCGTCTC CGCAGACTGG
TCACGCAGCA CCTTCACCAT GGACGCGCAG CCATCAGCGG CGGTGACAGA AGCGTTTGTA
CGCTGGTACG AAGAAGGGCT GATTTACCGC GGCCAACGTC TGGTCAACTG GGACCCGGTG
CTGAAAACCG CCATCTCTGA TCTGGAAGTG GAGAACGTCC AAGAAGAAGG CATGCTCTGG
TCGATCCGCT ATCCACTGAG CGACGGCGTC ACCTACGAAC ACATTGAGCA TGATGCCGCA
GGGAATGAAA CCCTGCGCGA GACCCGCGAC TCCCTCATCG TGGCCACCAC CCGTCCGGAA
ACCCTGCTCG GCGACACCGC AGTGATGGTG CATCCTGAGG ACCGGCGCTA CACCGCATTG
ATCGGTAAAA CCGTGACATT GCCGCTGACC GGACGCCAGA TCGAAGTGAT CAGCGACACC
TATGTCGAGC CCACATTCGG CACTGGCGTC GTCAAAGTCA CCCCGGCGCA CGACTTCAAC
GACTATCAAG TCGGCCTACG GCATCGCTTA CCCATGATCC AGGTGCTGGA CGATGCAGCG
TGCATTGTCT CCAAAACAAG CATCCAATCC GGGATAGCCT CCGGTGCCAC CAGCGACACA
ACAGACACCC CCAGCGATTC AGATGCCAGC AACGCCTCCA ATCAACATGA CACCCTGATC
ATGCCAGCGC ATTTGGCAGG CCTGGACCGC TACGAAGCAC GCAAGCAGAT ACTGGCCGAT
TTGGACGCAC AAGGCCTACT CGTCGCGGCG ACACCCCATA CCTTGCAAGT GCCGCGTGGC
GACCGCACCG GCCAGGTAAT TGAACCCTAT CTCACTGCAC AGTGGTTTGT GAGGATGGAG
ACGCTCGCCG CACGCGGATT GGAACTGGTC GAGCGCGGCG CCGTGAGATT TGTTCCGCCA
AACTGGATCA ACACCTACCG CCATTGGATG GAGAACATCC AAGACTGGTG CATCAGCCGC
CAACTGTGGT GGGGCCACCG TATCCCTGCC TGGTTCGACA CGCAGGGATG CGTCTACGTC
GGCCGCAGTG AAGCAGAAGT CCGTGCCAAA CACGCCCTCG GCCCCGAGGT GACACTCACC
CAGGACAACG ATGTATTGGA AACCTGGTTC TCCTCGCAAC TGTGGCCCTT CTCCACCCTG
GGGTGGCCCG ATCCAATGGC AATGGCCGAA CGCGGCTTTG AACGCTATCT GCCTTCATCG
GTGTTGGTCA CCGGATTCGA CATTATTTTC TTCTGGGTGG CCCGCATGAT CATGGCCACC
GACCATTTCA CCGGAAACGT GCCATTCCAC GATGTGTACA TCACTGGTCT GATTCGCGAT
GCCCAAGGCC AGAAAATGTC CAAATCCAAA GGCAACGTGC TCGACCCGCT GGACATCATC
GACGGCATTA CCCTAGATGA CCTGGTCGCC AAGCGCACCA CCGGACTGAT GCAACCCAAG
CTTGCCGAAA AAATCGCAAA AGCCACACGC AAAGAATTTC CTGACGGCAT TGCCCCGCAC
GGGGCCGATG CGTTGCGCTT CACCATCGCG GCACTAGCAA CCCACGGGCG CGATATTAAA
TTCGACCTTG GCCGCGCCGA AGGGTACAAA AACTTCTGCA ACAAATTGTG GAACGCCACC
CGTTTTGTAC TGATGAACAC TGCGGGCGAC ACCGCCCACT CACCCGCACA ACACCAGGCG
GGCCAAGACG GGCAGGACGT ACCCCGCACC CCGCAACCGC GCACCGACGC CGAACAATGG
ATTCTGTCGC GGCTGGCCGC CGTCACCGCA GAAGCACATG CGCAATTTGC CGCCTACCGC
TTCGATTTAT TAGCGCAGGC CTTGTACGAA TTTGCGTGGA ACGAATTTTG TGATTGGTTT
GTCGAACTGG CCAAACCCGC ACTCAATGGC GATGACACCC AAGCCGCCGC CAGCACCCGT
CACACCCTGC TGTACGTGTT AGAAACCCTG CTGCGTCTGC TGCATCCACT CATCCCGTTT
ATCACGGAAG AACTCTGGTG CCAGGTGGCG CCGCGCCTGG GCATCCAAGC AACCACGCTA
ATGCTACGCC CCTATCCGCA GCCACAGCAG CTAGAGACCA CAGCCTTCGC CAACGCCGCC
GCCGATGTTG AATGGCTAAA AATCATGGTC AGCGCATTGC GCCGGATACG CAGCACCCTC
AACGTGCCAC CTTCGCGGCG CATCTCCCTG CTGCTCCAAG GAGGCCAGGA GGTTGACCGG
CGTCGTATCA CGCATTTCGC CATTGCATTG CACTTTTTGC TCAAACTCGA ACACATCGAC
TGGCTGAGCG CCACGACCGC CGCCCCTCCG TCCGCGACAG CCATCGTTGG CAGCTTAAAA
CTCCTGGTGC CGCTGGAAGG TTTGATTGAT GTGGACGCCG AACGCGCGCG CTTGGATAAA
GAAATCAAAC GTGTCGAAAG CGAAATCGAT AAAAGCAACG GGAAATTGAG TAACGCCGTC
TTTGTGCAAA ACGCCCCTAC GGCGGTGGTG GAGCAAGAAC GCAGCCGCCT CAGGGAGTGG
ACGACACAAC TCAACGGGCT ACGCGAACGA CGCACCACAC TATGA
 
Protein sequence
MSQFTSSYDP TSFEARLYAE WEAAGHFKPS GVGQPYTILL PPPNVTGTLH MGHAFQQTLM 
DALVRYHRMC GDDTLWQVGT DHAGIATEMV VSRNMALEGR GETRDSLGRE GFINKVWEWK
QQSGDTIERQ MRRLGVSADW SRSTFTMDAQ PSAAVTEAFV RWYEEGLIYR GQRLVNWDPV
LKTAISDLEV ENVQEEGMLW SIRYPLSDGV TYEHIEHDAA GNETLRETRD SLIVATTRPE
TLLGDTAVMV HPEDRRYTAL IGKTVTLPLT GRQIEVISDT YVEPTFGTGV VKVTPAHDFN
DYQVGLRHRL PMIQVLDDAA CIVSKTSIQS GIASGATSDT TDTPSDSDAS NASNQHDTLI
MPAHLAGLDR YEARKQILAD LDAQGLLVAA TPHTLQVPRG DRTGQVIEPY LTAQWFVRME
TLAARGLELV ERGAVRFVPP NWINTYRHWM ENIQDWCISR QLWWGHRIPA WFDTQGCVYV
GRSEAEVRAK HALGPEVTLT QDNDVLETWF SSQLWPFSTL GWPDPMAMAE RGFERYLPSS
VLVTGFDIIF FWVARMIMAT DHFTGNVPFH DVYITGLIRD AQGQKMSKSK GNVLDPLDII
DGITLDDLVA KRTTGLMQPK LAEKIAKATR KEFPDGIAPH GADALRFTIA ALATHGRDIK
FDLGRAEGYK NFCNKLWNAT RFVLMNTAGD TAHSPAQHQA GQDGQDVPRT PQPRTDAEQW
ILSRLAAVTA EAHAQFAAYR FDLLAQALYE FAWNEFCDWF VELAKPALNG DDTQAAASTR
HTLLYVLETL LRLLHPLIPF ITEELWCQVA PRLGIQATTL MLRPYPQPQQ LETTAFANAA
ADVEWLKIMV SALRRIRSTL NVPPSRRISL LLQGGQEVDR RRITHFAIAL HFLLKLEHID
WLSATTAAPP SATAIVGSLK LLVPLEGLID VDAERARLDK EIKRVESEID KSNGKLSNAV
FVQNAPTAVV EQERSRLREW TTQLNGLRER RTTL