Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0094 |
Symbol | valS |
ID | 6203001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 130527 |
End bp | 133511 |
Gene Length | 2985 bp |
Protein Length | 994 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641701624 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001828825 |
Protein GI | 182680665 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAGT TCACCTCCAG CTATGACCCC ACCTCTTTTG AAGCGCGCTT ATACGCCGAG TGGGAAGCTG CAGGCCACTT CAAACCCTCC GGCGTAGGTC AGCCCTATAC CATCCTGCTA CCACCGCCGA ATGTCACCGG CACCCTGCAT ATGGGCCATG CCTTCCAACA AACCTTGATG GATGCGCTGG TGCGCTATCA CCGCATGTGT GGAGATGACA CCCTATGGCA AGTGGGCACC GACCACGCCG GTATCGCCAC CGAAATGGTG GTCAGCCGCA ATATGGCACT CGAAGGCCGC GGAGAAACCC GCGACTCGCT GGGCCGTGAA GGCTTTATCA ACAAAGTGTG GGAGTGGAAA CAGCAATCCG GCGACACCAT CGAACGGCAA ATGCGCCGCC TCGGCGTCTC CGCAGACTGG TCACGCAGCA CCTTCACCAT GGACGCGCAG CCATCAGCGG CGGTGACAGA AGCGTTTGTA CGCTGGTACG AAGAAGGGCT GATTTACCGC GGCCAACGTC TGGTCAACTG GGACCCGGTG CTGAAAACCG CCATCTCTGA TCTGGAAGTG GAGAACGTCC AAGAAGAAGG CATGCTCTGG TCGATCCGCT ATCCACTGAG CGACGGCGTC ACCTACGAAC ACATTGAGCA TGATGCCGCA GGGAATGAAA CCCTGCGCGA GACCCGCGAC TCCCTCATCG TGGCCACCAC CCGTCCGGAA ACCCTGCTCG GCGACACCGC AGTGATGGTG CATCCTGAGG ACCGGCGCTA CACCGCATTG ATCGGTAAAA CCGTGACATT GCCGCTGACC GGACGCCAGA TCGAAGTGAT CAGCGACACC TATGTCGAGC CCACATTCGG CACTGGCGTC GTCAAAGTCA CCCCGGCGCA CGACTTCAAC GACTATCAAG TCGGCCTACG GCATCGCTTA CCCATGATCC AGGTGCTGGA CGATGCAGCG TGCATTGTCT CCAAAACAAG CATCCAATCC GGGATAGCCT CCGGTGCCAC CAGCGACACA ACAGACACCC CCAGCGATTC AGATGCCAGC AACGCCTCCA ATCAACATGA CACCCTGATC ATGCCAGCGC ATTTGGCAGG CCTGGACCGC TACGAAGCAC GCAAGCAGAT ACTGGCCGAT TTGGACGCAC AAGGCCTACT CGTCGCGGCG ACACCCCATA CCTTGCAAGT GCCGCGTGGC GACCGCACCG GCCAGGTAAT TGAACCCTAT CTCACTGCAC AGTGGTTTGT GAGGATGGAG ACGCTCGCCG CACGCGGATT GGAACTGGTC GAGCGCGGCG CCGTGAGATT TGTTCCGCCA AACTGGATCA ACACCTACCG CCATTGGATG GAGAACATCC AAGACTGGTG CATCAGCCGC CAACTGTGGT GGGGCCACCG TATCCCTGCC TGGTTCGACA CGCAGGGATG CGTCTACGTC GGCCGCAGTG AAGCAGAAGT CCGTGCCAAA CACGCCCTCG GCCCCGAGGT GACACTCACC CAGGACAACG ATGTATTGGA AACCTGGTTC TCCTCGCAAC TGTGGCCCTT CTCCACCCTG GGGTGGCCCG ATCCAATGGC AATGGCCGAA CGCGGCTTTG AACGCTATCT GCCTTCATCG GTGTTGGTCA CCGGATTCGA CATTATTTTC TTCTGGGTGG CCCGCATGAT CATGGCCACC GACCATTTCA CCGGAAACGT GCCATTCCAC GATGTGTACA TCACTGGTCT GATTCGCGAT GCCCAAGGCC AGAAAATGTC CAAATCCAAA GGCAACGTGC TCGACCCGCT GGACATCATC GACGGCATTA CCCTAGATGA CCTGGTCGCC AAGCGCACCA CCGGACTGAT GCAACCCAAG CTTGCCGAAA AAATCGCAAA AGCCACACGC AAAGAATTTC CTGACGGCAT TGCCCCGCAC GGGGCCGATG CGTTGCGCTT CACCATCGCG GCACTAGCAA CCCACGGGCG CGATATTAAA TTCGACCTTG GCCGCGCCGA AGGGTACAAA AACTTCTGCA ACAAATTGTG GAACGCCACC CGTTTTGTAC TGATGAACAC TGCGGGCGAC ACCGCCCACT CACCCGCACA ACACCAGGCG GGCCAAGACG GGCAGGACGT ACCCCGCACC CCGCAACCGC GCACCGACGC CGAACAATGG ATTCTGTCGC GGCTGGCCGC CGTCACCGCA GAAGCACATG CGCAATTTGC CGCCTACCGC TTCGATTTAT TAGCGCAGGC CTTGTACGAA TTTGCGTGGA ACGAATTTTG TGATTGGTTT GTCGAACTGG CCAAACCCGC ACTCAATGGC GATGACACCC AAGCCGCCGC CAGCACCCGT CACACCCTGC TGTACGTGTT AGAAACCCTG CTGCGTCTGC TGCATCCACT CATCCCGTTT ATCACGGAAG AACTCTGGTG CCAGGTGGCG CCGCGCCTGG GCATCCAAGC AACCACGCTA ATGCTACGCC CCTATCCGCA GCCACAGCAG CTAGAGACCA CAGCCTTCGC CAACGCCGCC GCCGATGTTG AATGGCTAAA AATCATGGTC AGCGCATTGC GCCGGATACG CAGCACCCTC AACGTGCCAC CTTCGCGGCG CATCTCCCTG CTGCTCCAAG GAGGCCAGGA GGTTGACCGG CGTCGTATCA CGCATTTCGC CATTGCATTG CACTTTTTGC TCAAACTCGA ACACATCGAC TGGCTGAGCG CCACGACCGC CGCCCCTCCG TCCGCGACAG CCATCGTTGG CAGCTTAAAA CTCCTGGTGC CGCTGGAAGG TTTGATTGAT GTGGACGCCG AACGCGCGCG CTTGGATAAA GAAATCAAAC GTGTCGAAAG CGAAATCGAT AAAAGCAACG GGAAATTGAG TAACGCCGTC TTTGTGCAAA ACGCCCCTAC GGCGGTGGTG GAGCAAGAAC GCAGCCGCCT CAGGGAGTGG ACGACACAAC TCAACGGGCT ACGCGAACGA CGCACCACAC TATGA
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Protein sequence | MSQFTSSYDP TSFEARLYAE WEAAGHFKPS GVGQPYTILL PPPNVTGTLH MGHAFQQTLM DALVRYHRMC GDDTLWQVGT DHAGIATEMV VSRNMALEGR GETRDSLGRE GFINKVWEWK QQSGDTIERQ MRRLGVSADW SRSTFTMDAQ PSAAVTEAFV RWYEEGLIYR GQRLVNWDPV LKTAISDLEV ENVQEEGMLW SIRYPLSDGV TYEHIEHDAA GNETLRETRD SLIVATTRPE TLLGDTAVMV HPEDRRYTAL IGKTVTLPLT GRQIEVISDT YVEPTFGTGV VKVTPAHDFN DYQVGLRHRL PMIQVLDDAA CIVSKTSIQS GIASGATSDT TDTPSDSDAS NASNQHDTLI MPAHLAGLDR YEARKQILAD LDAQGLLVAA TPHTLQVPRG DRTGQVIEPY LTAQWFVRME TLAARGLELV ERGAVRFVPP NWINTYRHWM ENIQDWCISR QLWWGHRIPA WFDTQGCVYV GRSEAEVRAK HALGPEVTLT QDNDVLETWF SSQLWPFSTL GWPDPMAMAE RGFERYLPSS VLVTGFDIIF FWVARMIMAT DHFTGNVPFH DVYITGLIRD AQGQKMSKSK GNVLDPLDII DGITLDDLVA KRTTGLMQPK LAEKIAKATR KEFPDGIAPH GADALRFTIA ALATHGRDIK FDLGRAEGYK NFCNKLWNAT RFVLMNTAGD TAHSPAQHQA GQDGQDVPRT PQPRTDAEQW ILSRLAAVTA EAHAQFAAYR FDLLAQALYE FAWNEFCDWF VELAKPALNG DDTQAAASTR HTLLYVLETL LRLLHPLIPF ITEELWCQVA PRLGIQATTL MLRPYPQPQQ LETTAFANAA ADVEWLKIMV SALRRIRSTL NVPPSRRISL LLQGGQEVDR RRITHFAIAL HFLLKLEHID WLSATTAAPP SATAIVGSLK LLVPLEGLID VDAERARLDK EIKRVESEID KSNGKLSNAV FVQNAPTAVV EQERSRLREW TTQLNGLRER RTTL
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