| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0081 |
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| Symbol | |
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| ID | 6202703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 109990 |
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| End bp | 111123 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641701610 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001828812 |
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| Protein GI | 182680652 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATG TCCTTGATCT TGCCTGCGAT CTGATTTCCA GACCCTCAAT GACACCGGAT
GATGCCGGTT GCCAGGAAAT GATTGCAAAG CGCTTGGAGC GTGCAGGCTT CATCTGTGAA
CACCTGCGCT ATGCTGCGGT CAGCAACCTG TGGGCTACGC ATGGTCGAGG TGCGCCAGTG
CTGGTGTTGC TTGGTCACAC TGATGTGGTA CCTCCCGGTC CAGTTGAAGC ATGGACCTCC
GACCCGTTCA TGCCAGATAT GCGCAACGGC ATCCTGTACG GACGCGGTGC TGCTGACATG
AAAGGAAGTG TAGCCGCATT CGTCATTGCC GCCGAGCGTT TCCTGGCTGC GTATCCCCAG
CATCCAGGCA CATTGGCGAT CTTACTGACC TCTGATGAAG AGGGCCAAGC AATAGATGGT
GTCCGTAAGG TGGCCGAGAC GTTACGCCAG CGTGGTCAGG GTATTGATTG GTGCTTGACT
GGTGAACCGT CTTCGAGCAA ACGACTGGGT GACCTGCTGC GGGTCGGCCG TCGTGGCAGT
TTGTCGGCAA CGCTTCACGT GAAGGGCGTC CAGGGACATG TTGCCTATCC CCATCAAGCA
CGCAACCCCA TTCACCTCGC CTTACCTGCG TTCGCTGCAT TGACGGCGCG GCATTGGGAT
GACGGTTATG AATCCTTCCC GTCAACCAGC TTGCAGATCA GCAATATCCA CGCTGGAACC
GGCGCCAACA ACGTGATTCC TGGTGCACTG GAGGTTGCCT TCAATCTGCG TTACAACCCG
CATTGGATCG CCCCGCGCTT GGAGAGTGAG ATCGTCGCAT TACTCGATCA ACACGGGCTG
GACTATACCT TGCACTGGCA TCGTAGCGGT GAGCCGTTCT ATACCCCGGA AGGAAAATTA
CGTCGCATCG CACGTGAAGT ATTAGAACGT TTTTCCGGCG CCCCTCCGGA AGAAAGCACG
GGTGGCGGCA CGTCCGATGC GCGTTTTATT GCGCCACTGG GTGCGCAATG TATTGAGGTT
GGACCGGTCA ACGCCAGCAT TCACCAGGTT GATGAGCATG TGTGCCTGTC CGACTTGGAG
GCCCTGCCAG ACCTGTACCA GTTGCTAATT GAGCGGTTGC TTGCTGAACA TTGA
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| Protein sequence | MSDVLDLACD LISRPSMTPD DAGCQEMIAK RLERAGFICE HLRYAAVSNL WATHGRGAPV
LVLLGHTDVV PPGPVEAWTS DPFMPDMRNG ILYGRGAADM KGSVAAFVIA AERFLAAYPQ
HPGTLAILLT SDEEGQAIDG VRKVAETLRQ RGQGIDWCLT GEPSSSKRLG DLLRVGRRGS
LSATLHVKGV QGHVAYPHQA RNPIHLALPA FAALTARHWD DGYESFPSTS LQISNIHAGT
GANNVIPGAL EVAFNLRYNP HWIAPRLESE IVALLDQHGL DYTLHWHRSG EPFYTPEGKL
RRIAREVLER FSGAPPEEST GGGTSDARFI APLGAQCIEV GPVNASIHQV DEHVCLSDLE
ALPDLYQLLI ERLLAEH
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