| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0079 |
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| Symbol | dapD |
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| ID | 6202676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 108561 |
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| End bp | 109463 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641701608 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001828810 |
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| Protein GI | 182680650 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACCC AACCCCACCT TAAGGAAACC CCACCGCAAC AGGTGGATAA CAAGGCATCC
CCTCCTGTTG TGGATAAGAC ACTTGTTAGT GCGATTGAAG ATGCCTTCGC CCGTTACTCC
ACACTGACCG TGGAAGAGAT CGAAGATTCA ATCCGCCCAA CCGTTAACAG AGTGATCGAC
GGCCTGGAAA CTGGCGCGTT TCGTGTTGCT GAGCCGGATA ATCACGGTGG CTGGAAGGTT
AACGAGTGGC TGAAGAAAGC CGTATTGCTG TACTTCCGTG TCCATGACAC CACGATCGTT
GATGCTCAAC CCGCTCCCTT CTGGGACAAA GTTGAATCAC GCTTCTCTGG TTACGATGCA
GTGAAATTCC GCGCTGCCGG AGTGCGTGTC GTCCCAGGTG CGATTGCACG ACGTGGTAGC
TACTTTGGTA AAGATGTCGT GCTGATGCCA AGCTTCACCA ACATTGGTGC TTATGTGGGT
GAAGGCACCA TGATTGACAC CTGGGCAACC GTTGGTTCCT GTGCACAGCT TGGCGCCCAC
TGCCATCTTT CTGGCGGTGC GGCGATTGGT GGCGTACTCG AACCATTGCA AGCCAGCCCC
GCCATCATCG AAGACCATTG CTTCATTGGT GCCCGTTCGG AAGTGGTGGA GGGTGTGATC
GTGGGTCATC ACAGTGTGAT TGGCATGGGT GTGTTCATTA GCCAAAGTAC CCGGATCTAC
AACCGTGCCA CTGGCGAAAT CAGTTACGGT TATGTGCCGC CTTACAGCGT TGTGGTGTCT
GGCCAGCTTC CAGCAAAGGA TGGGACGCAC TCCCTGTACT GCGCGGTGAT TGTCAAGCAG
GTGGACGAAA AAACACGTGC CAAGACCAGT ATCAACGAGC TTCTGCGTGG TTTGGCAGAT
TGA
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| Protein sequence | MTTQPHLKET PPQQVDNKAS PPVVDKTLVS AIEDAFARYS TLTVEEIEDS IRPTVNRVID
GLETGAFRVA EPDNHGGWKV NEWLKKAVLL YFRVHDTTIV DAQPAPFWDK VESRFSGYDA
VKFRAAGVRV VPGAIARRGS YFGKDVVLMP SFTNIGAYVG EGTMIDTWAT VGSCAQLGAH
CHLSGGAAIG GVLEPLQASP AIIEDHCFIG ARSEVVEGVI VGHHSVIGMG VFISQSTRIY
NRATGEISYG YVPPYSVVVS GQLPAKDGTH SLYCAVIVKQ VDEKTRAKTS INELLRGLAD
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