Gene XfasM23_0066 details

Gene Information

• Locus tag: XfasM23_0066
• ID: 6202417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: -
• Start bp: 94459
• End bp: 96291
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641701595
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001828797
• Protein GI: 182680637
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGAGT ACCGATCCAA AACTTCCACC TACGGCCGCA ATATGGCTGG TGCGCGTGCG 
TTATGGCGCG CTACCGGCAT GAAGGATGAC GACTTCCAGA AGCCGATCAT CGCGATTGCT 
AATTCTTTCA CTCAATTCGT CCCAGGGCAC GTTCATCTAA AGGATCTTGG CCAGCTAGTC 
GCACGTGAAA TTGAGCGTCT CGGTGGTGTA GCCAAAGAAT TCAACACGAT TGCGGTAGAT 
GACGGTATCG CGATGGGGCA CGACGGAATG CTGTATTCGC TACCTAGTCG TGAAATCATC 
GCCGACTCCG TCGAATACAT GGCAAACGCG CATTGTGCTG ATGCGCTGGT ATGCATCTCC 
AACTGCGACA AAATCACTCC TGGCATGCTG ATGGCATCGC TCCGCCTGAA CATCCCAACG 
GTGTTCGTCT CAGGTGGGCC GATGGAAGCC GGAAAAACGA CACTGGCTGA TCACAAACTC 
GACCTAGTTG ACGCAATGGT GCTGGCTGCC GACCCTCACG CGAGTGACGA GGAAGTTGCT 
ACCGTGGAAC GCAGTGCCTG CCCCACTTGC GGTTCATGTT CGGGCATGTT TACTGCCAAC 
TCGATGAACT GTCTCACCGA AGCACTCGGT TTATCCTTGC CAGGTAACGG GACTGTCGTT 
GCGACGCATT CTGACCGTAA ACAACTGTTT TTGAACGCAG GACGCACTGT CATTGAGTTA 
TGTCACCGCT GGTATGGGGC TGAAGATGCC ACCGCATTAC CTCGAGGCAT TGCTACATTT 
GCTGCGTTCG AAAACGCGAT AACCCTAGAT ATCGCGATGG GCGGCTCGAC TAATACGATT 
TTGCACCTAC TTGCAGCCGC ACAGGAGGCG GAAGTGTCTT TTACGATGCA AGACATTGAT 
CGCTTGTCAC GGAATGTGCC GCAATTATGC AAAGTTGCTC CCAACACGCA GAAATACCAT 
ATTGAGGATG TGCACCGCGC TGGAGGCATC TTCGGGATTC TAGCTGAATT GGCACGGGGA 
AACTTGTTAC ATACTGACGT CGCAACCGTA CATAGCAAAA CCCTGGGTGA GGCCATCGCC 
ACATGGGACA TTATCGGGAC GCAGGATGAA GCGGTCCATA CGTTTTATAA AGCAGGTTCA 
GCAGGCATCC CAACCCAGGT GGCCTTCAGT CAAAGTACGC GTTGGCCGTC ACTCGATACT 
GATCGTACCG AAGGCTGCAT CCGTGACATG GAGCATGCGT TCTCGAAGGA AGGAGGCTTG 
GCAGTGCTCT ATGGCAACAT TGCCCAGGAT GGCTGCGTCG TAAAGACCGC CGGTGTAGAC 
GCATCAATCC ATGTGTTCGA AGGTTCGGCC CTGGTGTACG AAAGCCAGGA GGCAGCGGTC 
AAAGGAATCC TTAGCGACGA GGTACAACCA GGCATGATCG TCGTGATTCG CTACGAAGGC 
CCCAAGGGCG GCCCTGGCAT GCAGGAGATG CTGTATCCAA CGTCGTATTT GAAGTCCAAA 
GGTCTCGGGA AGCAATGTGC TCTATTCACC GATGGCCGGT TTTCTGGCGG GACCTCAGGT 
TTATCAATTG GCCACGCTTC ACCCGAAGCC GCAGCAGGTG GTGCTATTGG CCTCATCCGG 
GATGGCGACC GTATCCGCAT CGACATTCCA CAGCGCGCGA TCAATGTGCT CATCAGCGAA 
GAGGAGTTGG CTTCACGGCG CCTCGAACAA CATGCCATCG GCTGGAAGCC GGCCCAGTCA 
CGGACGCGTA AGGTCAGCAG TGCTCTGAAG GCGTATGCAT TACTTGCAAC CAGCGCCGAC 
AAGGGGGCCG TACGCAACAA AACGCTACTT TGA 

 

Protein sequence

MPEYRSKTST YGRNMAGARA LWRATGMKDD DFQKPIIAIA NSFTQFVPGH VHLKDLGQLV 
AREIERLGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREII ADSVEYMANA HCADALVCIS 
NCDKITPGML MASLRLNIPT VFVSGGPMEA GKTTLADHKL DLVDAMVLAA DPHASDEEVA 
TVERSACPTC GSCSGMFTAN SMNCLTEALG LSLPGNGTVV ATHSDRKQLF LNAGRTVIEL 
CHRWYGAEDA TALPRGIATF AAFENAITLD IAMGGSTNTI LHLLAAAQEA EVSFTMQDID 
RLSRNVPQLC KVAPNTQKYH IEDVHRAGGI FGILAELARG NLLHTDVATV HSKTLGEAIA 
TWDIIGTQDE AVHTFYKAGS AGIPTQVAFS QSTRWPSLDT DRTEGCIRDM EHAFSKEGGL 
AVLYGNIAQD GCVVKTAGVD ASIHVFEGSA LVYESQEAAV KGILSDEVQP GMIVVIRYEG 
PKGGPGMQEM LYPTSYLKSK GLGKQCALFT DGRFSGGTSG LSIGHASPEA AAGGAIGLIR 
DGDRIRIDIP QRAINVLISE EELASRRLEQ HAIGWKPAQS RTRKVSSALK AYALLATSAD 
KGAVRNKTLL