Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0063 |
Symbol | |
ID | 6202396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 92460 |
End bp | 93101 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641701592 |
Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
Protein accession | YP_001828794 |
Protein GI | 182680634 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.452145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACATA GCAAGAGCAG TCAGCGTTGG CTTAAGGAGC ATTTCTCCGA TCCCTTCGTG AAAAAAGCTC AAGCCGAGGG TATGCGCTCG CGAGCCGCAT ACAAGTTAGA AGAAATACTT AAACGTGATC GAATCCTCAG ACCGAACATG GTTGTGATCG ATCTTGGTGC TGCACCTGGA GGATGGTCGC AGCAAATACG CAAGCAGATG GGTGATAGCG GCAGGGTCAT CGCTTTGGAT ATCGTGAAGA TGGCGCCGCT GGTTGGAATA GAGTTCCTTC AAGGTGACTT CAGAGATAAA GCGGTCTTAT CTCAGCTCGA GATAATGCTC AAAGGCCAAC CCGTTGACCT TGTGCTTTCA GATATGGCCC CCAATAAGAG TGGAATAGAC GTAATGGACC AACCGCGGAT GATGTACTTA GCTGAGCTGG CGATGGATTT TGCGGACATC CATGTCAAAC CGGGCGGTTC GTTCCTAATC AAACTGTTCC ATGGAGTCGG ATCAGATGGC TACATCCGTC AATTACGACA CAGGTATAAA AAAGTTGCGA TCCGCAAACC ACTTGCTTCC CGCAAGCGCT CCCCAGAGGT TTATATCCTT GGTGACGGCA AGCTCACTCA GAATGAAGTA AGCTGCTCGT GA
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Protein sequence | MSHSKSSQRW LKEHFSDPFV KKAQAEGMRS RAAYKLEEIL KRDRILRPNM VVIDLGAAPG GWSQQIRKQM GDSGRVIALD IVKMAPLVGI EFLQGDFRDK AVLSQLEIML KGQPVDLVLS DMAPNKSGID VMDQPRMMYL AELAMDFADI HVKPGGSFLI KLFHGVGSDG YIRQLRHRYK KVAIRKPLAS RKRSPEVYIL GDGKLTQNEV SCS
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