| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0059 |
|---|
| Symbol | miaA |
|---|
| ID | 6202337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | - |
|---|
| Start bp | 88318 |
|---|
| End bp | 89271 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641701588 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_001828790 |
|---|
| Protein GI | 182680630 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.392141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCCG ACACGAGACC AGCCGCAATT GTACTCATGG GGCCAACCGC AAGCGGCAAA
AGCCAACTGG CCATTGATAT TGCCAAGCGT TGGGGAGGGG AGGTCATTAG TGTTGACTCG
GTTCTGGTCT ATCGTGGCTT AGACATCGGT ACTGCAAAGC CGAACGCGGC AATGCGTGCA
TCAGTACCGC ATCATTTGAT CGACATTTGT GAACCTTGGG AAACCTATTC TGCTGCCGAT
TTCGCGCATG ATGCACGCGC CGCAATCGAC ATGATCGTTA GACGTGGCGC ATTACCAATC
CTCACTGGCG GTACTGGACT GTACTTCCGT GCGTTACTGG CAGGTCTTTC GGATATGCCT
CCAGCTCATC CTGAAATACG CGCGATGATC GCGGCTGAAG CCAAGAGAGA CAGTTGGGCA
GCACTACACA CACGTTTGGC CGAAGTCGAT GCAATCACGG CTGCACGTAT CCACGCGACC
GACCCACAGC GAATTCAGCG TGCATTGGAA GTCTATCTAG TGAGCGGACA ATCAATGAGT
GATTGGCAAA ATCAGCCACC CAAACAACGA TTACCTTTGC GGGTTCTTAA GCTGGTGCTC
GCACCGACCC ATCGCAAAGT ACTGCACTTC AGGATCGCGC AGCGCTTCAA GGCAATGTTG
GATAACGGCC TACTTGCCGA GGTGAATGCG TTACGTACAC ACCCATCCAT CCACGCAATG
GCTCGACCAC TGGATCTTCC AGCAATGCGT GCGGTTGGCT ACCGCCAATG TTGGGAACAC
TTGGACGGCA TGTACACTGC CGAAATGCTG TATCAGCGCA GCGTTGCCGC CACACGTCAA
CTGGCCAAAC GTCAGTTAAC GTGGCTACGT GGCGAGCTGG ATGCCCTTTG GTTCGATCCA
GAACATGATC AATCCAGAAT AGAGAAAGTC ATGGAAGCAT TTTTAAACAG ATAA
|
|---|
| Protein sequence | MPADTRPAAI VLMGPTASGK SQLAIDIAKR WGGEVISVDS VLVYRGLDIG TAKPNAAMRA
SVPHHLIDIC EPWETYSAAD FAHDARAAID MIVRRGALPI LTGGTGLYFR ALLAGLSDMP
PAHPEIRAMI AAEAKRDSWA ALHTRLAEVD AITAARIHAT DPQRIQRALE VYLVSGQSMS
DWQNQPPKQR LPLRVLKLVL APTHRKVLHF RIAQRFKAML DNGLLAEVNA LRTHPSIHAM
ARPLDLPAMR AVGYRQCWEH LDGMYTAEML YQRSVAATRQ LAKRQLTWLR GELDALWFDP
EHDQSRIEKV MEAFLNR
|
|---|
| |