Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0056 |
Symbol | |
ID | 6202294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | - |
Start bp | 85213 |
End bp | 86520 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641701585 |
Product | major facilitator transporter |
Protein accession | YP_001828787 |
Protein GI | 182680627 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACA GCCTCTCCAC TGCACTTTCA CACTACACAG CAGAGGAGAA GCGCCATCGC ATTTTCGCGA TCATCGCCGT TTCCTCCGGC AACTTAGTCG AATGGTTCGA CTTTTACGTC TACGCATTCA CCGCGCTGTA TTTTTCCTCC CAGTTTTTCC CTGAGTCCAA TCAAACCGCA CAATTACTCA ACACTGCCGC AATCTTTGGT GCAGGCTTCT TGATGCGGCC TATCGGCGGC TGGCTGTTCG GCCGGATTGC CGATCGCTAC GGACGCAAAC GCTCGTTATT GATCTCGGTA ATGATGATGT GTGGCGGTTC AATGGTGATC GCCACGCTTC CTACCCATCA TATGATCGGT GCCTGGGCGG CGTTTTTATT ACTACTCGCA CGTCTGATAC AGGGTCTGTC GGTAGGTGGT GAGTACGGTT CTACCGCAAC TTACATGAGT GAAATTGCGC TGCGTGGACG ACGCGGCTTC TATTCCTCGT TCCAGTACGT CACGTTGATC GGCGGCCAGT TGCTAGCAGT GTTGACTCTG GTGGTGCTGG AAGCTTTATT CACTGAAGTT CAAATGCGCG CCTGGGGTTG GCGTATTCCA TTCATGATCG GTGCGATTGC CGCAGCAGTT GCGTTATTAC TACGCCGCAC ACTGAACGAA ACTCAATCAG AGGATAACCG ACATGACACC CATGCTGGTT CACTATCAAC CCTGTTCCGC GAGCACCGCA CTGCATTCCT AACCGTATTT GGATATACCG CTGGCGGCTC GCTGATTTTT TACACTTTCA CCACCTATAT GCAGAAGTTC CTAGTCAACA GTTCCGGCTT ATCCAAACAG ACTGCTAGTC TGGTGATGAG TGGCGCACTG TTTGTCTATA TGTGCATTCA ACCATTGTTC GGCCTACTGT CGGACTATAT CGGGCGGCGC AACAACATGC TGCTATTTGG TGGGTTAGGT GCGGTCTGTA CTGTACCGAT CCTCGCAACA TTACAGCGTA TTCATTCACC ACTACCCGCA TTTATATTGA TCGTAGGAGC GTTGTCGATT ATCAGCTTCT ACACCTCCAT CTCCGCCATC GTGAAAGCCG AGATGTTCCC AGCAAAAGTA CGGGCGCTAG GTGTGGGCTT CGCCTACGCA GTAGGTAACG CCATATTTGG TGGTTCGGCC GAATATATTG CCCTGGGACT GAAGAGCTTC GATCTAGAAA CGGTGTTCTT CTGGTACGTG GCAGCAATGA TGGCGGTCGT ATTCTTGGTC AGTTTGCGCC TACCACGGCA AGCCACGTAC CTGCATCATG ACCATTAA
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Protein sequence | MSDSLSTALS HYTAEEKRHR IFAIIAVSSG NLVEWFDFYV YAFTALYFSS QFFPESNQTA QLLNTAAIFG AGFLMRPIGG WLFGRIADRY GRKRSLLISV MMMCGGSMVI ATLPTHHMIG AWAAFLLLLA RLIQGLSVGG EYGSTATYMS EIALRGRRGF YSSFQYVTLI GGQLLAVLTL VVLEALFTEV QMRAWGWRIP FMIGAIAAAV ALLLRRTLNE TQSEDNRHDT HAGSLSTLFR EHRTAFLTVF GYTAGGSLIF YTFTTYMQKF LVNSSGLSKQ TASLVMSGAL FVYMCIQPLF GLLSDYIGRR NNMLLFGGLG AVCTVPILAT LQRIHSPLPA FILIVGALSI ISFYTSISAI VKAEMFPAKV RALGVGFAYA VGNAIFGGSA EYIALGLKSF DLETVFFWYV AAMMAVVFLV SLRLPRQATY LHHDH
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