Gene XfasM23_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0029 
Symbol 
ID6201930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp37629 
End bp38510 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content56% 
IMG OID641701553 
Producthypothetical protein 
Protein accessionYP_001828761 
Protein GI182680601 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACA GTCACGCCTT CCACGCGGGT AACCATGCCG ATGTTCTCAA ACATATTGTT 
TTGCTCGCGT TGCTGGATGG TCTAGTGCGA AAGGAGACGC CGTTCTTTGT GCTGGATTCT
CATGCCGGTC GCGGACGTTA CCTGCTTTCT GCCGGGGAGA GTCGCAATAC CAGGGAGGCT
GAGTCTGGAG TGATGCGATT GATAGCCCGT CCGCAGCGTT TGGAGGTGAT TAAGCGCTAT
GTGGATGTAG TGCAGGCGGA CAATGTTTCA CAGACACGGG CTGCAAGCAC TCCCATGCAT
ATCAGCCGTT ATCCTGGTTC ATCCCTACTG GCTGCGCAGG TGTGCCGTGC ACAAGATCGG
ATGGTGTTTT GTGAGTTGCA TCCCAAGGAG GCTGCGGCAC TGAACGCATT GTTCGTACAT
GATCCCAGGG TGCGTGTGCA TGCGGGGGAT GGTTATGCAG CGGTGCGTGC GTTTTTACCT
CCCAAGGTGG GGACACAGAG GATTGGGCGT GGCTTGGTAT TTATCGATCC GCCCTACGAG
GCACAGGATG CGGAGTATCC ATTGGTCTTG GGTGCGCTGC GCGAGACGTT GACGCGCTGG
CCGCAAGCGA TCTGCGCAGT GTGGTACCCC ATCAAGCAAC GGCGGCGTTT GCAGCCGTTC
TTCAGGAAGG CGGTGGGATT GCCGGTACGC TCGGTGTTGA TCGCTGAGTT GCTGGTGCGG
CTTGATGATT CGCCGCTACG TTTGAATGGC AGTGGCATGT TATTGCTTAA TGTGCCCTGG
CAATTCGATC AGCTTTTGGC TCCTGCATTG CCAGTGTTGA AAACCCAACT TGGCGAATCT
GGCGCACGTA CTCGGTTGGA GTGGCTCAAG GTGCCGCAGT GA
 
Protein sequence
MNYSHAFHAG NHADVLKHIV LLALLDGLVR KETPFFVLDS HAGRGRYLLS AGESRNTREA 
ESGVMRLIAR PQRLEVIKRY VDVVQADNVS QTRAASTPMH ISRYPGSSLL AAQVCRAQDR
MVFCELHPKE AAALNALFVH DPRVRVHAGD GYAAVRAFLP PKVGTQRIGR GLVFIDPPYE
AQDAEYPLVL GALRETLTRW PQAICAVWYP IKQRRRLQPF FRKAVGLPVR SVLIAELLVR
LDDSPLRLNG SGMLLLNVPW QFDQLLAPAL PVLKTQLGES GARTRLEWLK VPQ