Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0021 |
Symbol | |
ID | 6201899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 24814 |
End bp | 25764 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641701545 |
Product | hypothetical protein |
Protein accession | YP_001828753 |
Protein GI | 182680593 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4966] Tfp pilus assembly protein PilW |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCGTC GGTTTGCCCT GCAACGCCTC CAGCGTGGTT TCAATCTAAT TGAATTGATG ATCACATTGG TTCTTGGCCT GCTGGTCGTC CTCGCTGCCA TTTCAATGTT TATATCCAGT CGTCGGCTTT ATACGACGAC GGAGAATATG AGCCGCCTCC AGGAGTCGGC GCGTGTGGCG TTTGAACTCA TGGCACGTGA TCTACGCGAG GCCGGTGGTA ATGCCTGCGA CAACACCCTA CCCGTTGTTA ATGTACTCAG AGATTCCGCC ACAGAATGGT CGCGTAATTG GAATGTACCT CTCATCGGTT TTGATGGTGG TACCCTGACT CAAGGCGTCA GAGGAACAGA CGCAATCCGC ATTCTGTCTG CCGGGACCAG CGGAGGTACA GTTAAAAGTC ACGATCCGGT AAACAATACA ATGACCCTTT ATACGCAAGC CGCCGACTTG CATACCAACG GGATCATGAT GGTGTGCGAT CCTCAGCAGC TTTCAATATT CCAGGCCAGT AACGTTGCTG GAACCACTGT CAGTTATGGC AATGGTGCAT TGAATTCCTG CACTCACTTT GGTCGTTTGC CATCAGTGTG CAATGCGAAT CCACCCAATT ATCAGCACCA AGCCAATTCG ATCATCACCG AATTGCGTGC AGTGCAGTGG TATGTCAGAA CGAATGAGCG TGGCGGAACC TCCCTTTTTC AGGAGATTCG CGGTCCTAAT GGTGCGATTG CATTGGGCGA AGTCGCGGAA TCTATCAGCG CGATGCAAAT TACATACTTA TTAAGAGGTG CTACAAGTTA TGTCAGCGCC GCTCAAGTAT CGGAATGGAA AAATGTCATT GCGGTTAGAG TTGCCTTGAC GATCCAGACG ACCGACAGAG TGGGTGTTGA TAACAACGTC GTGTCACGCA CCCTCACCTC CGTCACCAGC TTACGGAACA GAAATTTATG A
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Protein sequence | MNRRFALQRL QRGFNLIELM ITLVLGLLVV LAAISMFISS RRLYTTTENM SRLQESARVA FELMARDLRE AGGNACDNTL PVVNVLRDSA TEWSRNWNVP LIGFDGGTLT QGVRGTDAIR ILSAGTSGGT VKSHDPVNNT MTLYTQAADL HTNGIMMVCD PQQLSIFQAS NVAGTTVSYG NGALNSCTHF GRLPSVCNAN PPNYQHQANS IITELRAVQW YVRTNERGGT SLFQEIRGPN GAIALGEVAE SISAMQITYL LRGATSYVSA AQVSEWKNVI AVRVALTIQT TDRVGVDNNV VSRTLTSVTS LRNRNL
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