Gene XfasM23_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0020 
Symbol 
ID6201896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp24338 
End bp24817 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID641701544 
Producttype IV pilus modification protein PilV 
Protein accessionYP_001828752 
Protein GI182680592 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.908433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCG CAAGCAAAAA AGCCGTTGCC GGCGTTAGTT TGATCGAAGT GCTGATTTCG 
GTATTTATTC TCGCCGTTGG CATGCTAGGC GTTGCGGCAA TGCAAGTCAT GGCGTTACGC
AACAATGATA GTGCTCTGCA GCGTAGCCAT GCAGTGATTC AGTCGTACGC GATTCTTGAA
GCAATGCGCG CCAATCGCAG CGAAGCGATC AAAGGCAGTT ACAACACCAA TGGAATGGTT
TGTACTGCGC CGCAAGCGAA CAGCCTGGTC GATGTTGATC GTCGTGATTG GATAAGCAAC
CTTAAGGCGG CGCTCGGTAA TTCTGAAAGA ACCTGTGGTT CGATCTCTTG TGATGCCGCC
AATACATGCA CGATCCAGGT GCAATGGGAC GAGACTCGTG CGAGTGATAA AAGGTCCCCA
GCCGGTCAGC TTGTCTCTTC CACGCAGACT CAAATTTTTG AAGTGAGGAG TAAACTGTGA
 
Protein sequence
MSIASKKAVA GVSLIEVLIS VFILAVGMLG VAAMQVMALR NNDSALQRSH AVIQSYAILE 
AMRANRSEAI KGSYNTNGMV CTAPQANSLV DVDRRDWISN LKAALGNSER TCGSISCDAA
NTCTIQVQWD ETRASDKRSP AGQLVSSTQT QIFEVRSKL