Gene XfasM23_0003 details

Gene Information

• Locus tag: XfasM23_0003
• Symbol: recF
• ID: 6204034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M23
• Kingdom: Bacteria
• Replicon accession: NC_010577
• Strand: +
• Start bp: 3044
• End bp: 4138
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641701526
• Product: recombination protein F
• Protein accession: YP_001828735
• Protein GI: 182680575
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.26612
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACATCA CTCAGCTCGT CTTACGTCAT TTTCGTTGTT TTGATGTCGT TGATTTCTTT 
CCATTACCTG GACTGAATTT TTTCATTGGT GAAAATGGTT CAGGTAAGAC TAGTTTACTT 
GAAGCCGTAC ATTTAATGGG TTACGGGCGG AGCTTTCGCG GCAGGGTCCG TGATGGTTTG 
ATCCGACATG GCTCTGAAAA TCTAGAAATT TTTGTGGATT GGCAAGAAAC TGCTTTAATT 
AATGCACGTC GACGTCGTGC AGGTTTAAGT CACTATGGGC AAGAATGGAT AGGACGTTTA 
GATGGTCAAA AGATAATGCA TTTGGCTAGT TTATGCGCTG CATTAGCAGT GATTACTTTT 
GAATCAAGTA GTTACCAACT CATCAATAGT AACGCCGAAT TACGACGTCG GTTCTTGGAT 
TGGGGATTAT TCCATGTTGA ACCAGATTTT CTGGATTTAT GGCGTCGCTA TACACATGTG 
CTTAAACAAC GTAATTCTTT ACTTAAGCAG AAAGAAGAAT TAGCCATGTT AGAAGCTTGG 
GATCAAAAAT TGAGTGAAGT TGGTGAACAA TTGACTTTCC GTCGGTTTCA ATATTTGGAG 
AGATTGAAAC AACGAGTGAT CCCTTTAATT TCAAGAATAA CACCTAATTT AAAAATCCAT 
GGTTTTAATT TTAATCATGG ATGGCGTCGT CACGAATTGC CGTTGATTGA TGCTTTATTT 
ATTTCGCGTG AACGTGATTA TCAGTATGGT TATACTTCAT TAGGACCGCA TCGTTCGGAT 
TGGACTCCGC AATTTTCCAG TATTCCTGGA GTTCATTTTT TATCTCGTGG ACAAGGAAAA 
CTTATAACAT TGATGTGCCT ACTAGCTCAG GCGCAGGACT TTTTTGATCA GCGTGGGGAG 
TGGCCTATTC TTGCTTTAGA TGACTTGGCT TCAGAATTGG ATCAGAAACA TCAATGGCGC 
GTGTTAGAGA TGCTAGCTGA AATTCCAGCC CAGGTCTTGA TCACGGGGAC AGAAATTCCC 
CAAGGACTCA AGCCTTTTTT CTCAGTGGGT GCTATGTTTC ACGTGGAACA TGGCGCTATC 
ACGCGAATGT TTTGA 

 

Protein sequence

MHITQLVLRH FRCFDVVDFF PLPGLNFFIG ENGSGKTSLL EAVHLMGYGR SFRGRVRDGL 
IRHGSENLEI FVDWQETALI NARRRRAGLS HYGQEWIGRL DGQKIMHLAS LCAALAVITF 
ESSSYQLINS NAELRRRFLD WGLFHVEPDF LDLWRRYTHV LKQRNSLLKQ KEELAMLEAW 
DQKLSEVGEQ LTFRRFQYLE RLKQRVIPLI SRITPNLKIH GFNFNHGWRR HELPLIDALF 
ISRERDYQYG YTSLGPHRSD WTPQFSSIPG VHFLSRGQGK LITLMCLLAQ AQDFFDQRGE 
WPILALDDLA SELDQKHQWR VLEMLAEIPA QVLITGTEIP QGLKPFFSVG AMFHVEHGAI 
TRMF