Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4625 |
Symbol | |
ID | 6205818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5941425 |
End bp | 5942555 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641694292 |
Product | hypothetical protein |
Protein accession | YP_001821495 |
Protein GI | 182416429 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.306336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTTT CGCCCCCAGT CCGCAGCAGC GCCCGCGCCG CTGGTCGCCT GGACGGAAAC GTGTTGGAGG TGGAGCTCGG CGGATCGTGG CGGATCACCG ATCGTCGGCC CGCGTGGATG GACGTCGTGA GCAGCCACCG CCCGGCGAAA CTGAGGCTGC ACGTGGACGC GGTCGAGCGG TGGGACAGCT CGTTGCTGTT GTTCCTGTTC GAGATCGGCG AATGGTGCCG GGCGAACCAG GTAGCGTGCG ACACGACGGT GCTGCCGCCG CGGGTGCAGA CCCTGTTGAC GCAGCTGGCG TCGTCGCACG CCACGAGCGT GCCGCACGAT CGCTCGGTCA ATTTTCTGGC GGTGGTCGGC AACGCGACGA TGGAGCTGTC GCGCAAGACG CAGGATTTCG TGCAGTTCTT CGGTGAGTGC GTGCTCGGGG CGGTGAAGCT GCTGAAGCGG CCGGACAAGT TTCGCTGGCG CGACTGCCTC GAGGAAATGC AGCAGTGCGG CGCGATGGCG CTGCCGATCG TCAGCCTGAT CGCGTTTCTC GTGGGCGTGA CGCTCGCGTA CATCGGCGCG CTCGTGCTGC GACAATACGG TGGCGACATC TACGTCGCGG ACCTGATCGG CATGGCGATG GTCCGTGAAA TGGGCGCGGT CATGACGGCG GTGGTGCTAG CGGGCCGGAC CGGCGCGGCG TTTGCCGCGC AACTCGGCAA CATGAAGGCC AACGAGGAGA TCGATGCGCT GGAGACGCTG GGTATTTCGC CGGTGCAGTT CCTCGTGATG CCACGCTTGC TGGCGCTGGG CGTGATGATG CCGCTGCTCG CGTTGTATGC GAATGCGCTG GGCATTCTCG GCGGCATGGC GGTGTCGGCG GGGGTGTTGG ACATTTCACC GTCAGCTTAC TGGGTCGAGA TGGGCACGAT CGTGACGTTG CGCGACGTCG CGTCCGGGTT CATCAAGGCG ATCGCGTTCG GCGGCATCGT CGGGCTGTCG GGTTGTTTGC GCGGACTGCA GGCGGAGCGC AGCGCGGCGG GCGTCGGTCG GGCTGCGACC TCGGCGGTGG TGACGTCGAT CCTGCTGCTC GTGGTGGCGG ATGCGATTTT CGCGGTGCTG TTCAACGTGA TCGGATTGTG A
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Protein sequence | MPVSPPVRSS ARAAGRLDGN VLEVELGGSW RITDRRPAWM DVVSSHRPAK LRLHVDAVER WDSSLLLFLF EIGEWCRANQ VACDTTVLPP RVQTLLTQLA SSHATSVPHD RSVNFLAVVG NATMELSRKT QDFVQFFGEC VLGAVKLLKR PDKFRWRDCL EEMQQCGAMA LPIVSLIAFL VGVTLAYIGA LVLRQYGGDI YVADLIGMAM VREMGAVMTA VVLAGRTGAA FAAQLGNMKA NEEIDALETL GISPVQFLVM PRLLALGVMM PLLALYANAL GILGGMAVSA GVLDISPSAY WVEMGTIVTL RDVASGFIKA IAFGGIVGLS GCLRGLQAER SAAGVGRAAT SAVVTSILLL VVADAIFAVL FNVIGL
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