Gene Oter_4625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4625 
Symbol 
ID6205818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5941425 
End bp5942555 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content66% 
IMG OID641694292 
Producthypothetical protein 
Protein accessionYP_001821495 
Protein GI182416429 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.306336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTT CGCCCCCAGT CCGCAGCAGC GCCCGCGCCG CTGGTCGCCT GGACGGAAAC 
GTGTTGGAGG TGGAGCTCGG CGGATCGTGG CGGATCACCG ATCGTCGGCC CGCGTGGATG
GACGTCGTGA GCAGCCACCG CCCGGCGAAA CTGAGGCTGC ACGTGGACGC GGTCGAGCGG
TGGGACAGCT CGTTGCTGTT GTTCCTGTTC GAGATCGGCG AATGGTGCCG GGCGAACCAG
GTAGCGTGCG ACACGACGGT GCTGCCGCCG CGGGTGCAGA CCCTGTTGAC GCAGCTGGCG
TCGTCGCACG CCACGAGCGT GCCGCACGAT CGCTCGGTCA ATTTTCTGGC GGTGGTCGGC
AACGCGACGA TGGAGCTGTC GCGCAAGACG CAGGATTTCG TGCAGTTCTT CGGTGAGTGC
GTGCTCGGGG CGGTGAAGCT GCTGAAGCGG CCGGACAAGT TTCGCTGGCG CGACTGCCTC
GAGGAAATGC AGCAGTGCGG CGCGATGGCG CTGCCGATCG TCAGCCTGAT CGCGTTTCTC
GTGGGCGTGA CGCTCGCGTA CATCGGCGCG CTCGTGCTGC GACAATACGG TGGCGACATC
TACGTCGCGG ACCTGATCGG CATGGCGATG GTCCGTGAAA TGGGCGCGGT CATGACGGCG
GTGGTGCTAG CGGGCCGGAC CGGCGCGGCG TTTGCCGCGC AACTCGGCAA CATGAAGGCC
AACGAGGAGA TCGATGCGCT GGAGACGCTG GGTATTTCGC CGGTGCAGTT CCTCGTGATG
CCACGCTTGC TGGCGCTGGG CGTGATGATG CCGCTGCTCG CGTTGTATGC GAATGCGCTG
GGCATTCTCG GCGGCATGGC GGTGTCGGCG GGGGTGTTGG ACATTTCACC GTCAGCTTAC
TGGGTCGAGA TGGGCACGAT CGTGACGTTG CGCGACGTCG CGTCCGGGTT CATCAAGGCG
ATCGCGTTCG GCGGCATCGT CGGGCTGTCG GGTTGTTTGC GCGGACTGCA GGCGGAGCGC
AGCGCGGCGG GCGTCGGTCG GGCTGCGACC TCGGCGGTGG TGACGTCGAT CCTGCTGCTC
GTGGTGGCGG ATGCGATTTT CGCGGTGCTG TTCAACGTGA TCGGATTGTG A
 
Protein sequence
MPVSPPVRSS ARAAGRLDGN VLEVELGGSW RITDRRPAWM DVVSSHRPAK LRLHVDAVER 
WDSSLLLFLF EIGEWCRANQ VACDTTVLPP RVQTLLTQLA SSHATSVPHD RSVNFLAVVG
NATMELSRKT QDFVQFFGEC VLGAVKLLKR PDKFRWRDCL EEMQQCGAMA LPIVSLIAFL
VGVTLAYIGA LVLRQYGGDI YVADLIGMAM VREMGAVMTA VVLAGRTGAA FAAQLGNMKA
NEEIDALETL GISPVQFLVM PRLLALGVMM PLLALYANAL GILGGMAVSA GVLDISPSAY
WVEMGTIVTL RDVASGFIKA IAFGGIVGLS GCLRGLQAER SAAGVGRAAT SAVVTSILLL
VVADAIFAVL FNVIGL