Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4612 |
Symbol | |
ID | 6207793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5923207 |
End bp | 5925351 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641694280 |
Product | immunoglobulin I-set domain-containing protein |
Protein accession | YP_001821483 |
Protein GI | 182416417 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.830673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGCTA ACGTGTTCGC GCGGTGGTTG CGTCGGCTCG TTTTGCTGGC CGTCGCCGGC GTGACGGTGG CGTCGGCGTT TGTGCTCTAC TACGACGACA GCGATCTCTA CCTGATTAAA TGGTATCGCA CGCCCGTGGT GATGCATGTC GCTTTGCCGA CCACGGCGAC GCTCAGCGAC GGCAGCAGCC TGTTGAGCAG CGTTGGAGTC GCGATGCAGA CGTGGAACGC GCAGCTGGGC GCGGTTCAAT TCAGCGCCGG CGCGGCGCAG ACGCCCGCCT ACACGCTCGG CAATGAGATC AATGAAATCG CCATCGACAA AGATGTGGAC GGACAGGCGT TCTCATCCGG CACGCTCGCG CTGACGATGA TCTACTCCTA TGGGAACGAT TTTGCCGAGA CCGACATCGT GTTCAACAAC GCCTATACGT GGGATTCCTA TCGCGGCGCA GTGCGCGCGG ATCGGCAGGA CATTCGCCGC GTCGCGGTCC ACGAACTCGG CCACGTGCTG GGACTGAACC ATCCGGACCA AGCCAACCCG CGGCAGAACG TCACGGCGAT CATGAACAGT CACGTGAGCT CGATCGAAGC GCCGCAGTCG GATGACGTGG CCGGGGTGCG CACGCTCTAC GGCACGCCCG GCGTGACGCC GGTCAATGAT CGTTTCGGCG AGGCTACGGT GATCATCCTG ACCAACGGGC AGCGCAGCAT GACCGGCAGC AACATCGGCG CTTCGCGTGA AAGTGGCGAA CCGGGTCACG CCGGGGCGAC GGGTATCCAC TCGGTGTGGT GGAACTGGAC CGCGCCGAGC AATGGAACGC TCGTGGCTGA CACCTTCGGC AGCAATTTCG ACACGGTGCT GGCGGTCTAC ACCGGAACCA GCGTGACCGC GCTCACGCCG GTGGCCGCCA ACGACGACGA GGAAAGTCCG GAGCAGAACT CGACGCCGCA ACGGAAGCGA ACGAGCAAGA TCACGACGGC CGTGACTGGC GGCACGATCT ACCGCATTGC CGTCGACGGA TGGGGCGACA ACGACAACAG CATTCCCGAC GGCTACACCG GCGCGATCAC GTTGAATCTT CGGTTCAGCG CCACGAGTGA AACTGCTCCC GTGATCACCA CCCAGCCGGG CAGCGGGTCG ATCGCGGCCG GGGGCGCTCT CAGTCTCTCC GTCGCGGCGA CGAGCGAGCC GGCTCCCACT TACCAATGGC AGCGCAATGG CGTCGACGTC GCGGGTGGGA CAGGAGCGAC GCTGTTGTTG AACAATGTGC AGCCGGCCGA CGCGGGACTT TACGTGGCGG TGGCCAAGAA CGGCACGCTC TCGACGGCGA GCAGGGCGGC GATTGTCGGC GTAACCACCG CGGCGAAGGT GATCGGGACC GGGGAGGTGG TGGGCAGCGA CATCCTTCAT TCGAATGGGA ACGTATTCGA TCAGGTGTTG GTGACCGGGG CGGCGGAGGC GATCACGGCG GATTGGAATC TCAATCAGAT CACGCGGACG TCGTACATCG ATATCGACGG CGACATCGTG CAGGTGGAGT TCAGCGGGCC GGGGACGCTG TCGCTGGTGC TTGATGCGGC GACGGCACCG GCGTTGGCCG AGAAATACAA TCAACCGGGC GTGCTGTATG TGACCGGCCA CGCGGGGATC GTCATCACGG GTGCAACCGA GAACACGAAC GTGACGGTGT TCACCGTCGG GACCGGCACG GCCGTGAACC AGGCGTTGTT CAAGACAGGC GTCAGCTATG ATGGGCTGGC GGATATCGCC TTCATCGCGA TCTCGAGTAC GAACGGAAAA TTCGGCGGAT TGCGCGCGGC GAACACGACA TTCTTCGCGC AGCGCGGGCA TACGGGGGTT TATGCACCAG GCGTGGAGTT CACCGGGCCG GTCTATGTCG GCGACGTGAG CGCGTATGAC GAGGCACAGC CGGTATTGGT GCTGGGCTCG GCGTCCGACG TGCGGGTCAC CGGCGGCGAC ATGCTGCAGG CCAACGGTCG GCCCGTGCAG GTGAGCGGGA TCGCGCAGCT ACGGTTCACC CCTGGCAGTG ACTCGCACGG GCACACGTTG TCGGCGCAGG CCAATCGTGC CGTCTATCAG GAGGGCGGCG TCGACGTCAC GGCGCGGATC GTGGTGAATC CGTAG
|
Protein sequence | MNANVFARWL RRLVLLAVAG VTVASAFVLY YDDSDLYLIK WYRTPVVMHV ALPTTATLSD GSSLLSSVGV AMQTWNAQLG AVQFSAGAAQ TPAYTLGNEI NEIAIDKDVD GQAFSSGTLA LTMIYSYGND FAETDIVFNN AYTWDSYRGA VRADRQDIRR VAVHELGHVL GLNHPDQANP RQNVTAIMNS HVSSIEAPQS DDVAGVRTLY GTPGVTPVND RFGEATVIIL TNGQRSMTGS NIGASRESGE PGHAGATGIH SVWWNWTAPS NGTLVADTFG SNFDTVLAVY TGTSVTALTP VAANDDEESP EQNSTPQRKR TSKITTAVTG GTIYRIAVDG WGDNDNSIPD GYTGAITLNL RFSATSETAP VITTQPGSGS IAAGGALSLS VAATSEPAPT YQWQRNGVDV AGGTGATLLL NNVQPADAGL YVAVAKNGTL STASRAAIVG VTTAAKVIGT GEVVGSDILH SNGNVFDQVL VTGAAEAITA DWNLNQITRT SYIDIDGDIV QVEFSGPGTL SLVLDAATAP ALAEKYNQPG VLYVTGHAGI VITGATENTN VTVFTVGTGT AVNQALFKTG VSYDGLADIA FIAISSTNGK FGGLRAANTT FFAQRGHTGV YAPGVEFTGP VYVGDVSAYD EAQPVLVLGS ASDVRVTGGD MLQANGRPVQ VSGIAQLRFT PGSDSHGHTL SAQANRAVYQ EGGVDVTARI VVNP
|
| |