| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4544 |
|---|
| Symbol | |
|---|
| ID | 6207343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5844496 |
|---|
| End bp | 5845047 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641694212 |
|---|
| Product | CMP/dCMP deaminase zinc-binding |
|---|
| Protein accession | YP_001821415 |
|---|
| Protein GI | 182416349 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.285833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.383896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGCCC GAACGGTCTC GCCGAAGGCC GCCGTGGGCT CCGCGCTCGC CAGCGGCGCG
AACCACCACA CACTGGCCGT GATGACTCCC GAGACTTACA TGCGCGAAGC GATCCAGCTG
GCCGACGACG GCATGCGGGC CGACCGCGGC GGCCCCTTTG GCTGCGTCAT CGTGCGCCGC
GGTGAGATCG TGGCGCGAGG TCAGAATCGC GTCACCTCGA CCAACGATCC CACCGCGCAC
GCGGAAGTCA CCGCGATCCG CGAGGCGGCG CAGCGGCTCG GCACGTTTCA GCTCGGCGAT
TGCGAGCTCT ACACCAGTTG CGAGCCGTGT CCGATGTGTT TGTCCGCGAT CTATTGGGCC
CGCATTCCGA CGGTCTATTA CGCCAACACG CGAAAGGACG CGGCGGCGAT CGGGTTCGAC
GACGATTTTA TCTACCAGCA GATCCCGCTG CCGCCGGAGC AGCGCACGGT GAAGATGCTC
CCGCTGCTGC ACGACGCGGC CCAGAGCACG TTTCAGGCGT GGGCCGTTAA ACCGGACAAG
GTGCGGTATT AA
|
|---|
| Protein sequence | MNARTVSPKA AVGSALASGA NHHTLAVMTP ETYMREAIQL ADDGMRADRG GPFGCVIVRR
GEIVARGQNR VTSTNDPTAH AEVTAIREAA QRLGTFQLGD CELYTSCEPC PMCLSAIYWA
RIPTVYYANT RKDAAAIGFD DDFIYQQIPL PPEQRTVKML PLLHDAAQST FQAWAVKPDK
VRY
|
|---|
| |