Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4543 |
Symbol | |
ID | 6207396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5842994 |
End bp | 5844265 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641694211 |
Product | hypothetical protein |
Protein accession | YP_001821414 |
Protein GI | 182416348 |
COG category | [S] Function unknown |
COG ID | [COG5368] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.483705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.411575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCTT CGCCCAACGA TTTCACCAAG GACCGCGCCC CGATCGATGC CGACACCGCC TTGCTCGAGG ACCTCGAGCG GCGGGCGGTC CAGTTTTTCA TCGAGCAGAG CGATCCGGTC ACCGGGTTGA CCTTCGATCG CGCGCCGGCG AACGGCGAGA GCATGTCGGA GTATCCGGCC AGCATCGCGG CGACGGGTTT CGCGCTGTCG GCCTGGTGCA TCGCGGACGC GCGCGGCTGG CTGCCGCCGG GAGAAGCGGT GACGCGCGCG CGGACGACGT TGAAATTCGT GCTAGAGAAC GTGGAGCACG AGCGCGGCTG GATCTACCAT TTCATCCACG CGAGTTCGGG CGGACGCATG TGGCACAGCG AGGCGTCGAC GATCGACACG GCGCTTTTTC TGTCGGGCGC TTTGACCGCG CGGGAATACT TCAGCGATGC GGCCGTGCAG ATGCTCGTCG ACGCGCTGTA TGCGCGGATC GACTGGCACT GGGCGCTCAA TGGCGGCGAC ACGCTGTCGC ACGGTTGGAA GCCGGAGAGC GGCTTCATCC CCTGGCGCTG GGATCGCTAT TCGGAGTTGA TGGGCCTTTA CCTGCTCGGC ATCGGCGCGC CGGTGAACGC GCTGCCGGCG AGCAGCTGGC GGGCGTGGAA ACGCGAACCG ATCACGACGT ATGCCGGCCG GACGTTCGTG GACGGCGGGC CGCTTTTCAC GCATCAATAC GCGCACGCGT GGTTCGATTT TCGCGACCGG CACGATGGGC TGCTCGACTA CTGGCAGAAC TCGGTCGAGG CCACGCTGGC GCAGCGCGAC TGGTTCGCGC AGCAGGCGGA GCGGTTTCCG GCGTGGTCGC TGGGCCTGTG GGGACTGACC GCGTCGGACA GCGCTGCGGG CTACGTGGCG TGGGGCGGGC CGGGGAGTTT CGCACCGGAA GCAGTGGACG GAACGGTGGT CCCCTGCGCG CCGGCGGGTT CGCTGCCCTT TGCGCCGCGT GAGTGCCTCA CGGCGCTACG CCGAATGCGC GAAGTCGGCG GCGAGAAGGT GTGGCGCCGC TACGGATTCG TGGACGCGTT CAATCCGCAC ACCGGCTGGA CGTCCGGCGA TGTCATCGGC ATCGATGTCG GCATCACGCT GTTGATGGCC GAGAACCTCC GCTCGGGGCT CATCTGGAAA ATTTTCATGG AAGCCGATGA GGTTCGGCGG GGGTTGCGGC TGGCGGGTTT CAAGACGGCG GAGCCGCAGT GGGCCGCGGA CCGGGTGGCG CAAACTGAGT GA
|
Protein sequence | MAASPNDFTK DRAPIDADTA LLEDLERRAV QFFIEQSDPV TGLTFDRAPA NGESMSEYPA SIAATGFALS AWCIADARGW LPPGEAVTRA RTTLKFVLEN VEHERGWIYH FIHASSGGRM WHSEASTIDT ALFLSGALTA REYFSDAAVQ MLVDALYARI DWHWALNGGD TLSHGWKPES GFIPWRWDRY SELMGLYLLG IGAPVNALPA SSWRAWKREP ITTYAGRTFV DGGPLFTHQY AHAWFDFRDR HDGLLDYWQN SVEATLAQRD WFAQQAERFP AWSLGLWGLT ASDSAAGYVA WGGPGSFAPE AVDGTVVPCA PAGSLPFAPR ECLTALRRMR EVGGEKVWRR YGFVDAFNPH TGWTSGDVIG IDVGITLLMA ENLRSGLIWK IFMEADEVRR GLRLAGFKTA EPQWAADRVA QTE
|
| |