| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4333 |
|---|
| Symbol | |
|---|
| ID | 6205311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5621076 |
|---|
| End bp | 5622350 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641694000 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001821205 |
|---|
| Protein GI | 182416139 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.48776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGG CTGCGACACT CGACTATCCC GTCTGGCTCC GCGTCGGCAC GCTGCTCGAC
GGGGTCGGCA CGACTCCGCT GCGCGATGTA CACGTCGTCT ATCGCCATGA CGGTATCCGT
TACGTGGGTC CCGGCGATCG CTCGCCCCCG CGCGAACTGG TGCGGGCAGG GCAAACGGGC
CCTGACGTCC ATGCGCCGGA CGCGACGCTG CTGCCGGGCT TGATCGAAGC GCATGCGCAC
TTGTTTCTCG AGGGTGGCGA ACTCGATCTG CAGAAACGCG CGGCCTACCT CCAGCAGACG
TCCGAGCAGT TGCTCGCCGC GGCGAACGAG CGGCTCGGCA AACTCGTGCG GCTGGGAATC
GCGGGCGTGC GTGATGCTGG GGACAAAGAC GGCGTCGGTC TGGCGCTGAG CCGGCTCTAC
CGTTCGGCGC AGCGACCGTT GATGCCGTAT TTGGAGAGCC CGGGCGCGGC GATTCATCAT
CGCGGCCGCT ACGGCAGCTT CATGGCCGAC CCGATCGAGA ACCATGCGTC ACTGCGTGCG
TGCGTGGAGT CGCGGATCGC GGCGGGGGCT GATCGAATCA AGCTGATCCC GACCGGCATC
ATCAATTTCA AGCAAGGCGC GGTCACGACC GAGCCGCAGA TGACCACCGC GGAGGTCGCT
GAAATCGTGC GCGCGGCGCG TTCGGCCGGC CGGCAGACGT TCGCGCATGC CTCGGGCGAC
ATCGGCATCG ATCGCGCGAT CGAAGGCGGC GTCGATTCGA TCGAACATGG TTTTTTCATG
CGCGCGGATC AACTCGCGCG GCTGCGCACG CTGCATACCG CGTGGGTGCC GACGTTCGCG
CCGGTGCAGG AACAGATCGA CCACGCCGAC CTGATGGGCT GGGACGCGGA GGTGATCGGA
AACCTACGGC GGATTCTGGA GCAACACGCC GCGAGTCTGG CGAAAGCGCA CGCGATGGGC
GTGCTGATCG TCGCGGGCAG CGATGCCGGA TCGTGCGGGG TCGCGCATGG CACCGGCTTC
CTTTACGAGC TCGAACTGAT GGAGCGCGCG GGAATGCCCT CGGTCGCCGT CATCAACGCC
GCCACCGGAG TCAGTGCTGG CCGGCTGCGG TATCAGGAGC GGATTGGTCG GATCGAGCCG
GGCTATCGCT CGCGGATGAT CCTGACGCGG CATTCGCCAC TCACGACGAT CGCGAACCTG
CGAAAGGCCC GGACGGTGAT TTTTGATGGT GAGGTTTTCG AGACCGGCGA GGATGCTGAC
ATCAAAAATC TTTAG
|
|---|
| Protein sequence | MIPAATLDYP VWLRVGTLLD GVGTTPLRDV HVVYRHDGIR YVGPGDRSPP RELVRAGQTG
PDVHAPDATL LPGLIEAHAH LFLEGGELDL QKRAAYLQQT SEQLLAAANE RLGKLVRLGI
AGVRDAGDKD GVGLALSRLY RSAQRPLMPY LESPGAAIHH RGRYGSFMAD PIENHASLRA
CVESRIAAGA DRIKLIPTGI INFKQGAVTT EPQMTTAEVA EIVRAARSAG RQTFAHASGD
IGIDRAIEGG VDSIEHGFFM RADQLARLRT LHTAWVPTFA PVQEQIDHAD LMGWDAEVIG
NLRRILEQHA ASLAKAHAMG VLIVAGSDAG SCGVAHGTGF LYELELMERA GMPSVAVINA
ATGVSAGRLR YQERIGRIEP GYRSRMILTR HSPLTTIANL RKARTVIFDG EVFETGEDAD
IKNL
|
|---|
| |