Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4331 |
Symbol | |
ID | 6205990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5619151 |
End bp | 5619924 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693998 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001821203 |
Protein GI | 182416137 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACTC CCATTTTCCC TGACGTTTTC TCGCTCCGTG AGGAGCACGT ACTCATCACC GGCGGCGGCA CCGGCATCGG CTTCGCGGTG GCGCGCTCGA TGCATGACGC GGGCGCCCGC GTGGTGCTGA TCGGCCGCCG CGAGGCCGAG CTGGCGAAGG CTGTGGAGTC ACTCGGGCCG GGCTCTTCCT ACCTTGTCCA CGACATCACG CAGCTCGACG CTGCAGCCCC GTTGATCGAG CGGATCACGA AGGAGCACGG GCCGATCACC AGCCTCGTGA ACAACGCGGG CATCCATCTC AAGAAACCGG CGATCGATAC CACGCCGGAG GAGTTTCAGC GGGTGCTGAC CACGCATATC CTCGGCGCGC ACGCGTTGTG CCGGGCGGTC GAGCCGTCGA TGATCCAGCG GAAACACGGC ACGATCATCT TCATGGCCTC GATGGCCTCG CTGTTCGGGA TTCCGCAGGT CGTGGCCTAC AGCGCCGCGA AGTCAGCCAT GATCGGCATG CTGCGCACGA TGGCCACGGA GTTCTCGGCG CATGGGATCC GCGTGAACGC AATCGCGCCG GGCTGGATCG AGACCGAGAT GTCGCGCAAG GCGATGGAGG GCGATCCCGC GCGGAGAACG AAAATCATCA GCCGCACCCC GATGGCGAAG TTTGGCGATC CGTCCGACGT CGGCTGGGCG GCGGTCTATC TCGCGTCACC CGCCTCCAAG TTCGTGACCG GCGCGGTGCT GCCGGTCGAC GGCGGCGCGA GCATGGGATT CTGA
|
Protein sequence | MKTPIFPDVF SLREEHVLIT GGGTGIGFAV ARSMHDAGAR VVLIGRREAE LAKAVESLGP GSSYLVHDIT QLDAAAPLIE RITKEHGPIT SLVNNAGIHL KKPAIDTTPE EFQRVLTTHI LGAHALCRAV EPSMIQRKHG TIIFMASMAS LFGIPQVVAY SAAKSAMIGM LRTMATEFSA HGIRVNAIAP GWIETEMSRK AMEGDPARRT KIISRTPMAK FGDPSDVGWA AVYLASPASK FVTGAVLPVD GGASMGF
|
| |