Gene Oter_4331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4331 
Symbol 
ID6205990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5619151 
End bp5619924 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID641693998 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001821203 
Protein GI182416137 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTC CCATTTTCCC TGACGTTTTC TCGCTCCGTG AGGAGCACGT ACTCATCACC 
GGCGGCGGCA CCGGCATCGG CTTCGCGGTG GCGCGCTCGA TGCATGACGC GGGCGCCCGC
GTGGTGCTGA TCGGCCGCCG CGAGGCCGAG CTGGCGAAGG CTGTGGAGTC ACTCGGGCCG
GGCTCTTCCT ACCTTGTCCA CGACATCACG CAGCTCGACG CTGCAGCCCC GTTGATCGAG
CGGATCACGA AGGAGCACGG GCCGATCACC AGCCTCGTGA ACAACGCGGG CATCCATCTC
AAGAAACCGG CGATCGATAC CACGCCGGAG GAGTTTCAGC GGGTGCTGAC CACGCATATC
CTCGGCGCGC ACGCGTTGTG CCGGGCGGTC GAGCCGTCGA TGATCCAGCG GAAACACGGC
ACGATCATCT TCATGGCCTC GATGGCCTCG CTGTTCGGGA TTCCGCAGGT CGTGGCCTAC
AGCGCCGCGA AGTCAGCCAT GATCGGCATG CTGCGCACGA TGGCCACGGA GTTCTCGGCG
CATGGGATCC GCGTGAACGC AATCGCGCCG GGCTGGATCG AGACCGAGAT GTCGCGCAAG
GCGATGGAGG GCGATCCCGC GCGGAGAACG AAAATCATCA GCCGCACCCC GATGGCGAAG
TTTGGCGATC CGTCCGACGT CGGCTGGGCG GCGGTCTATC TCGCGTCACC CGCCTCCAAG
TTCGTGACCG GCGCGGTGCT GCCGGTCGAC GGCGGCGCGA GCATGGGATT CTGA
 
Protein sequence
MKTPIFPDVF SLREEHVLIT GGGTGIGFAV ARSMHDAGAR VVLIGRREAE LAKAVESLGP 
GSSYLVHDIT QLDAAAPLIE RITKEHGPIT SLVNNAGIHL KKPAIDTTPE EFQRVLTTHI
LGAHALCRAV EPSMIQRKHG TIIFMASMAS LFGIPQVVAY SAAKSAMIGM LRTMATEFSA
HGIRVNAIAP GWIETEMSRK AMEGDPARRT KIISRTPMAK FGDPSDVGWA AVYLASPASK
FVTGAVLPVD GGASMGF