| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4322 |
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| Symbol | |
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| ID | 6205141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5604820 |
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| End bp | 5606565 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693989 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001821194 |
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| Protein GI | 182416128 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCC AACCCTCCAC CCTTTTCGCC ATCGCCGCCT TCTCGCTCGC CGCGAGCTCC
TTTGCCGCCG CGCCCGCACC GGTCGCTTTC GACTCCTTCG AATACACCGG CCGCGACGAC
ATCTTCGCCG CGCCGCTGCC CGCCGGCCAC TACCGCAATC CGATCCTCGC GGGTTTCTAT
CCGGACCCGA GCGTGTGCCA GGTGGGCCAG GACTATTACC TGATCAACTC CACGTTCGCC
TACTATCCCG GCATCCCGAT CTTCCACAGC CGTGACCTCG TGAACTGGCG GCAGATCGGC
CACGTCATTC ACCGCCCGAA TCAGTTGTCC TACGACAAGC TGGGCGTCAG CCGCGGGCTT
TTCGCTCCGG CGCTCAGCTA TCACGAGCCG TCGAAAACGT TTTACGTCGT CTGCACGCTG
GTCGACGGCG GCGGCAATTT CTTCGTCACC GCCCAGGATC CCGCTGGTCC GTGGTCCGAT
CCGGTGTGGC TCGATTTCGA CGGCATCGAC CCCTCGCTGT TCTTCGATGA CAACGGCCGC
GCCTGGCTCG TGAACAACGG CAATCCGCCG GACAACAAGC CGATCTACCA AGGCCATCGC
GCGATCTGGA TTCAGGAGTT CGACGTGAAG GCGCAGAAAC TCATCGGTCC GCGCAGCATC
ATCATCAATG GCGGCGTCGA TCTCGCCAAG CAGCCCGTCT GGATCGAAGG TCCGCACCTC
TACCAGCGCG GCGGCTGGTA TTACCTGTGT TGCGCCGAGG GCGGCACGTC GGACCAGCAC
TCGCAGGTCA TCTTCCGCAG CAAGGCGCCG ACGGGGCCGT TCACGCCGTG GAGCGATAAT
CCGATTCTCA CGCAGCGCGA TCTCGATGGC ACCGTGCCGC ACGCAGTGAC TGCGACCGGG
CACGCCGATC TCGTCGAAGG ACCCGATGGC CAGTGGTGGT CGGTGTTCCT CGCGTGCCGG
CCGTTCGCCG GCCGCTATTT CACCACCGGC CGCGAAACTT TCTTGCTGCC GGTGAAATGG
ACCGAGGATG GCTGGCCGCG GATCCTCCCC CACGGCGAGC GCGTGCCCTA TGTGGTGAAA
GCGCCGGTAG GGCCGGCGCT CGCCGCCGGC CGCGAACAAC CCAACTCAGC CGCGGCTGCC
GACAAGCGGC AGCCCTACGA TGACGTTCCT CTCACCGGCA ACTTCACCTG GCGCGACGAT
TTCGATTCCG CGACGCTCTC GCCGCTCTGG ATCATGGTGC GGGCGCCGAA GGAAACCTGG
TGGCAGCTCG GTCAGCCGGC CGGCCGGCTC AGCCTCACGC CACGTGCCGA CGCGCTCTCG
GGCACAGGCA ATCCTTCCTT CCTCGCGCGC CGGGTGCAGC ACGCGAAATT CGAAACTTCG
ACCACGCTCG TTCCCCCGGC GACGGTCGGC ACCTCGGGCG GACTCGTCGC GTTTCAGAGC
GAAACCCACT ACTACTACTT CGGCGTGCGG CGCACGTCCG ACGGACTCGT TCTTTTCCTC
GAACTCATGA ACGGTCCCAC GCCGGAAATC GTCGCGACAA CGAAGCTCGA CGCGGCGGCG
GATGCGCCGA TCACGCTCCG GCTCGTAGGG AACGAGATGA CGCTGGGCTT CGACTACCGC
GTTTCGAACG GCGAGTGGAA ATCATTCGTC CCCGCGGCTG ACACGCAGCC GATCACCGTA
CAAGCCGCCG GCGGCGGGCT GCACTTCACC GGCGCCGTGG TCGGCATGCA CGCGCGGACC
GAGTAG
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| Protein sequence | MKPQPSTLFA IAAFSLAASS FAAAPAPVAF DSFEYTGRDD IFAAPLPAGH YRNPILAGFY
PDPSVCQVGQ DYYLINSTFA YYPGIPIFHS RDLVNWRQIG HVIHRPNQLS YDKLGVSRGL
FAPALSYHEP SKTFYVVCTL VDGGGNFFVT AQDPAGPWSD PVWLDFDGID PSLFFDDNGR
AWLVNNGNPP DNKPIYQGHR AIWIQEFDVK AQKLIGPRSI IINGGVDLAK QPVWIEGPHL
YQRGGWYYLC CAEGGTSDQH SQVIFRSKAP TGPFTPWSDN PILTQRDLDG TVPHAVTATG
HADLVEGPDG QWWSVFLACR PFAGRYFTTG RETFLLPVKW TEDGWPRILP HGERVPYVVK
APVGPALAAG REQPNSAAAA DKRQPYDDVP LTGNFTWRDD FDSATLSPLW IMVRAPKETW
WQLGQPAGRL SLTPRADALS GTGNPSFLAR RVQHAKFETS TTLVPPATVG TSGGLVAFQS
ETHYYYFGVR RTSDGLVLFL ELMNGPTPEI VATTKLDAAA DAPITLRLVG NEMTLGFDYR
VSNGEWKSFV PAADTQPITV QAAGGGLHFT GAVVGMHART E
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