Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4322 |
Symbol | |
ID | 6205141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5604820 |
End bp | 5606565 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693989 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001821194 |
Protein GI | 182416128 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCC AACCCTCCAC CCTTTTCGCC ATCGCCGCCT TCTCGCTCGC CGCGAGCTCC TTTGCCGCCG CGCCCGCACC GGTCGCTTTC GACTCCTTCG AATACACCGG CCGCGACGAC ATCTTCGCCG CGCCGCTGCC CGCCGGCCAC TACCGCAATC CGATCCTCGC GGGTTTCTAT CCGGACCCGA GCGTGTGCCA GGTGGGCCAG GACTATTACC TGATCAACTC CACGTTCGCC TACTATCCCG GCATCCCGAT CTTCCACAGC CGTGACCTCG TGAACTGGCG GCAGATCGGC CACGTCATTC ACCGCCCGAA TCAGTTGTCC TACGACAAGC TGGGCGTCAG CCGCGGGCTT TTCGCTCCGG CGCTCAGCTA TCACGAGCCG TCGAAAACGT TTTACGTCGT CTGCACGCTG GTCGACGGCG GCGGCAATTT CTTCGTCACC GCCCAGGATC CCGCTGGTCC GTGGTCCGAT CCGGTGTGGC TCGATTTCGA CGGCATCGAC CCCTCGCTGT TCTTCGATGA CAACGGCCGC GCCTGGCTCG TGAACAACGG CAATCCGCCG GACAACAAGC CGATCTACCA AGGCCATCGC GCGATCTGGA TTCAGGAGTT CGACGTGAAG GCGCAGAAAC TCATCGGTCC GCGCAGCATC ATCATCAATG GCGGCGTCGA TCTCGCCAAG CAGCCCGTCT GGATCGAAGG TCCGCACCTC TACCAGCGCG GCGGCTGGTA TTACCTGTGT TGCGCCGAGG GCGGCACGTC GGACCAGCAC TCGCAGGTCA TCTTCCGCAG CAAGGCGCCG ACGGGGCCGT TCACGCCGTG GAGCGATAAT CCGATTCTCA CGCAGCGCGA TCTCGATGGC ACCGTGCCGC ACGCAGTGAC TGCGACCGGG CACGCCGATC TCGTCGAAGG ACCCGATGGC CAGTGGTGGT CGGTGTTCCT CGCGTGCCGG CCGTTCGCCG GCCGCTATTT CACCACCGGC CGCGAAACTT TCTTGCTGCC GGTGAAATGG ACCGAGGATG GCTGGCCGCG GATCCTCCCC CACGGCGAGC GCGTGCCCTA TGTGGTGAAA GCGCCGGTAG GGCCGGCGCT CGCCGCCGGC CGCGAACAAC CCAACTCAGC CGCGGCTGCC GACAAGCGGC AGCCCTACGA TGACGTTCCT CTCACCGGCA ACTTCACCTG GCGCGACGAT TTCGATTCCG CGACGCTCTC GCCGCTCTGG ATCATGGTGC GGGCGCCGAA GGAAACCTGG TGGCAGCTCG GTCAGCCGGC CGGCCGGCTC AGCCTCACGC CACGTGCCGA CGCGCTCTCG GGCACAGGCA ATCCTTCCTT CCTCGCGCGC CGGGTGCAGC ACGCGAAATT CGAAACTTCG ACCACGCTCG TTCCCCCGGC GACGGTCGGC ACCTCGGGCG GACTCGTCGC GTTTCAGAGC GAAACCCACT ACTACTACTT CGGCGTGCGG CGCACGTCCG ACGGACTCGT TCTTTTCCTC GAACTCATGA ACGGTCCCAC GCCGGAAATC GTCGCGACAA CGAAGCTCGA CGCGGCGGCG GATGCGCCGA TCACGCTCCG GCTCGTAGGG AACGAGATGA CGCTGGGCTT CGACTACCGC GTTTCGAACG GCGAGTGGAA ATCATTCGTC CCCGCGGCTG ACACGCAGCC GATCACCGTA CAAGCCGCCG GCGGCGGGCT GCACTTCACC GGCGCCGTGG TCGGCATGCA CGCGCGGACC GAGTAG
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Protein sequence | MKPQPSTLFA IAAFSLAASS FAAAPAPVAF DSFEYTGRDD IFAAPLPAGH YRNPILAGFY PDPSVCQVGQ DYYLINSTFA YYPGIPIFHS RDLVNWRQIG HVIHRPNQLS YDKLGVSRGL FAPALSYHEP SKTFYVVCTL VDGGGNFFVT AQDPAGPWSD PVWLDFDGID PSLFFDDNGR AWLVNNGNPP DNKPIYQGHR AIWIQEFDVK AQKLIGPRSI IINGGVDLAK QPVWIEGPHL YQRGGWYYLC CAEGGTSDQH SQVIFRSKAP TGPFTPWSDN PILTQRDLDG TVPHAVTATG HADLVEGPDG QWWSVFLACR PFAGRYFTTG RETFLLPVKW TEDGWPRILP HGERVPYVVK APVGPALAAG REQPNSAAAA DKRQPYDDVP LTGNFTWRDD FDSATLSPLW IMVRAPKETW WQLGQPAGRL SLTPRADALS GTGNPSFLAR RVQHAKFETS TTLVPPATVG TSGGLVAFQS ETHYYYFGVR RTSDGLVLFL ELMNGPTPEI VATTKLDAAA DAPITLRLVG NEMTLGFDYR VSNGEWKSFV PAADTQPITV QAAGGGLHFT GAVVGMHART E
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