| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4313 |
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| Symbol | |
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| ID | 6205835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5593208 |
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| End bp | 5594701 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693980 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001821185 |
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| Protein GI | 182416119 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0453293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCT CTCCGCACAT CCTGCCTGTC CGCGAGAAGA TCGGCTACGC GCTCGGCGAC
GTAGCGACGA ACTTCTTCTT CCAGTCGATG ATTCTCTACC AGACCCGGTT CTACACCGAT
ACGGTAGGGC TCTCGGCCTC CGCCGTGGGC TGGATGTTCC TCATCCTGCG TCTCGCCGAC
GCCTTTGTGG ACCCGGTGGT GGGCGCGCTC TCCGATCGCA CCAACACCCG CTGGGGCAAG
TTCCGCCCGT GGATCCTGTG GACCGCGCTG CCGTTCGGTC TGATCTTCTG GGCCGTCTAC
ATCACGCCCA ACGTCGGGAT GACCGGCAAG CTGATCTACG CCTACATCAC TTACGTGCTG
GTGATGATGT TCTACTCGGC GAACAACACG CCCTACGCCG CGCTGATGGG CGTCATGACG
CCGGACGTCA GCGAACGCGC CAACATCGCC CGCTACCGCT TCGTCGGCGC GCTGGTCGGT
CAGTTTCTCA TCCAGGCGCT CGCGCTTCCG CTCGTCGACA AATTCGGCCA GGGCGATAGC
GCCAAGGGCT GGGCCATCAC CATGGCCATC TTCGGTGGCG CGATCGTGAT CTGCAGCCTG
GCCGTGTTCC TCTCGACCAA GGAACGCGTT CTGCCGCCAC CGGAACAGAA GCCGTCACTC
AAGGAGGACA TCAAGAGCGT CGTCGGGTGC AAGCCGTGGC TCGCGATGTT CATCCTCACC
TTGATGATCT TCACGATGCT GGTCGTCCGC GGCAGCCTGA CCAATTACTT CTTCACGTAT
TACATGGATC CGAACGCGAT CCGCTCCTTC CTCGACAACT TCGGGCTGGC GGCGGTGAAC
GCGGGCGAAA CGGTCTCCGC CTGGCGTTCG GTGCTCAATG CGTTGGGCCT GCAGATTCTC
CCCGATGCCT CCAACGCTTC CGGCGTCGGC CAGGCGTTCT TCTTCGTGAT CGGCTCGATC
GTCCAGATCT TCTGCATCCT CATCTCGAAG CCGCTCGCCG ATCGTTTCGG CAAAAAGACG
GTCTTCATCG TCGGCTTCCT CATCACCATC GCCGCCACCT GTGCCGTGTT CTGGGTGCCG
CCGACCGCGA TGACCGCGCT CTTCTGGCTC AGCATCATCT GGGGTCTGGG CTGGGGCCCG
ACGGTCCCGC TGCTGTGGGT GATGATCGCC GACGTGGCCG ACTATTCCGA ATGGCAGACG
TCGCGCCGGG CGACCGGGTT CACCTACGCT GGCATTCTGT TCGCCCTCAA GGCTGGTCTC
GGTCTCGGCG GTGCGCTCTC GGGCTGGATC GTTGGCCTCT ACGGCTACGT CCCGAACGTC
GCGCAGACGG AGCATTCGCT GCTCGGCATA CGGCTCGGTG CCTCGATCTA CTCGGCCGTG
CCGCTGTTGG TCGGACTCGT CTGCCTGATC TACTATCCGA TCACCAAGGC GCTGAATCTG
CAGATTCAGA ACGAACTCGA AGCGCGTCGC GAAAAAGCCG CCGCGAAAAC GTAA
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| Protein sequence | MSASPHILPV REKIGYALGD VATNFFFQSM ILYQTRFYTD TVGLSASAVG WMFLILRLAD
AFVDPVVGAL SDRTNTRWGK FRPWILWTAL PFGLIFWAVY ITPNVGMTGK LIYAYITYVL
VMMFYSANNT PYAALMGVMT PDVSERANIA RYRFVGALVG QFLIQALALP LVDKFGQGDS
AKGWAITMAI FGGAIVICSL AVFLSTKERV LPPPEQKPSL KEDIKSVVGC KPWLAMFILT
LMIFTMLVVR GSLTNYFFTY YMDPNAIRSF LDNFGLAAVN AGETVSAWRS VLNALGLQIL
PDASNASGVG QAFFFVIGSI VQIFCILISK PLADRFGKKT VFIVGFLITI AATCAVFWVP
PTAMTALFWL SIIWGLGWGP TVPLLWVMIA DVADYSEWQT SRRATGFTYA GILFALKAGL
GLGGALSGWI VGLYGYVPNV AQTEHSLLGI RLGASIYSAV PLLVGLVCLI YYPITKALNL
QIQNELEARR EKAAAKT
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