| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4289 |
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| Symbol | |
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| ID | 6208169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5566714 |
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| End bp | 5568432 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693957 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001821162 |
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| Protein GI | 182416096 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.786059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGCC CCTTTAGCCT CATGACCCTG CTTTCGACTG CGCTCGCCGC GTCTGTCACT
TCCGCCGTCC CACCTTGGGC GGCCGATCTC GGCGACGGCA CCTACCGCAA TCCGGTACTC
TACGCCGACT ACTCGGATCC TGATGCGATC CGCGTCGGCG ACGACTACTG GCTCATCTCG
TCGAGTTTCA GCCACGTGCC CGGGCTGCCG ATCCTGCACT CGCGCGACCT GGTCAATTGG
TCGCTCGTCG GTCACGCGTT GCCGCGGCTG GTGCCCGAGA CGGCGTTCGC CACGCCGCAG
CCCGGCAAGG GCGTCTGGGC CCCCGCGATC CGCCACCACG CGGGCCGGTT CTGGATCTAT
TATCCCGATC CCGATTTCGG ACTCTATGTC CTCACCGCCG ATGATCCGCG CGGTCCGTGG
TCAGCACCCA CGCTCGTGAA AGCGGGGCGA GGGCTGATCG ATCCGTGTCC GTTGTGGGAC
GATGACGGCT CGCTTTATCT GATCCACGGC TGGGCCCACA GCCGCGCAGG GTTTGCCAAC
GTCCTCTCGC TGCTCCGGCT CAGCGCCGAC GGCACGCACG TCGAGGAGGA TCTCGGCATC
CTGATCGATG GCCACAAGGT CCCGGGCTGC ACTACGCTCG AAGGCCCAAA GCTCTACCGG
CGCAATGGCT GGTATTACGT CTTCGCGCCC GCCGGTGGCG TGAAGCAAGG CTGGCAATCC
GTGTTCCGCG CGCGCGCGCT GACCGGACCC TACGAGCATC GCATCGTCCT CGCGCAGGGC
ACCACGCCGA TCAACGGACC GCATCAGGGC GCGCTCGTCG ATACGCCGAC CGGCGAAGAG
TGGTTCCTGC ACTTCCAGGA TCAGCACGCC TACGGCCGCG TCGTGCACCT GCAGCCGGTC
GTGTGGAAAA ACGACTGGCC CGTGATCGGC AACGATCCGG ACGGCGACGG CACCGGGGAG
CCGGTACTCG TTTTCCGCAA ACCCGACGTA GGGCCGGCGC TCGCCGGCGG TGAGCCTGTC
GAATCCGCGG CCGGCCGGGA AACCCCCGAC CACCGCTCGA CTGCCGGCCA GCGGCAGCCC
TACGAGACAC CTTTGCCCGT CGGAGCCGCT CGCGTCGCGC CACCGCTTGC CGCCATTCCC
TGTTCCGACG AGTTCGCCTC GCCGGAGCTC GGCTTGCAGT GGCAATGGCA GGCAAACCCG
CGCGCCGAGT GGCTCTCGCT CACCGCGCGG CCAGGCTGGT TGCGGCTGTT CGCGCACCCC
GTCGCGACTG GCAATCTCTA CCACGCCCCG CAGCTGCTCC TCCAAAAGCT CCCCGCGCCC
GCGTTCACCG TCACCACGAA GCTCGACTTC ACTCACGCTG CCGCCGGCGA CGCCGCCGGA
CTGATCGTGT TCGGCTACGA CTATGCGTGG CTCGGCGTCC GCGACGGGAA GCTTGTCCAC
GTCGTCGTGA AACACGCGCA CCAGCAACCG GTGCGGACCG AAACCCCGCT CGAGGTTCCC
GTCGCGGGTC CTTGTTTCCT GCGCCTGGTC GTCCGCGAGG GCGCCCACTG CGAATTTTCC
CACAGCACCG ACGGCCGGCA CTACACGCCC ATCGGCACTC CCTTCGTTGC GAACGTTTCG
CGCTGGGTCG GTGCCAAGAT GGGCCTGTTC GCCGCCGGTC CGGGCAGCTC CGCCGCCGAT
TGGGAATTCT TCCACGTCGA GCCCGTGAGT GCGCGTTGA
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| Protein sequence | MLRPFSLMTL LSTALAASVT SAVPPWAADL GDGTYRNPVL YADYSDPDAI RVGDDYWLIS
SSFSHVPGLP ILHSRDLVNW SLVGHALPRL VPETAFATPQ PGKGVWAPAI RHHAGRFWIY
YPDPDFGLYV LTADDPRGPW SAPTLVKAGR GLIDPCPLWD DDGSLYLIHG WAHSRAGFAN
VLSLLRLSAD GTHVEEDLGI LIDGHKVPGC TTLEGPKLYR RNGWYYVFAP AGGVKQGWQS
VFRARALTGP YEHRIVLAQG TTPINGPHQG ALVDTPTGEE WFLHFQDQHA YGRVVHLQPV
VWKNDWPVIG NDPDGDGTGE PVLVFRKPDV GPALAGGEPV ESAAGRETPD HRSTAGQRQP
YETPLPVGAA RVAPPLAAIP CSDEFASPEL GLQWQWQANP RAEWLSLTAR PGWLRLFAHP
VATGNLYHAP QLLLQKLPAP AFTVTTKLDF THAAAGDAAG LIVFGYDYAW LGVRDGKLVH
VVVKHAHQQP VRTETPLEVP VAGPCFLRLV VREGAHCEFS HSTDGRHYTP IGTPFVANVS
RWVGAKMGLF AAGPGSSAAD WEFFHVEPVS AR
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