| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4264 |
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| Symbol | |
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| ID | 6204256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5512957 |
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| End bp | 5513724 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693932 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001821137 |
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| Protein GI | 182416071 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTCCA TCCTCGAAAA ATTCAGTCTC AACGGAAAAG TCGCCGTCGT CACCGGCGCC
GCGCGCGGCC TCGGTCAGGG CATGGCCCTC GCGCTCGCCG AAGCCGGCGC GGACATCGTC
GCGGTCGACA TCCTCCCCGC CGATGACACC AAGAAGCAGG TCGAGGCGCT TGGTCGCAAA
GCGATCACGC TCGCCGCCAA TCTCGGCGAC CGCGCCGCGA TCCCACAGGT GATCGCCAAC
GCCCGCAAGC AGTTCGCCCA CCTCGACGTG CTCGTGAACT GCGCCGGCAT CATCCGCCGC
GAGGACTTCA CCAAGTTCTC CGAGAAAGAC TGGGACGACG TCATGGGCAT CAACATCGAC
GCCGTGTTTT TCCTCTCGCA GGCGTTCGTG CGCGACGCGA TCGAGCGCAA CGCGCCGGCG
AAGATCATCA ACATCGCCTC GATGCTGTCG TTCCAAGGCG GTATCCGCGT CCCCTCCTAC
ACGGCGTCGA AGAGCGCGGT GCAGGGACTC ACGCGGCTGA TGGCGAATGA ACTCGCCGCG
AAGGGCATCA ACGTGAACGC GATCGCGCCC GGCTACATGG CCACCGACAA CACCGCGCCG
CTGCGCGCCG ACGAGAAACG CAGCGCGGCG ATTCTCGAGC GCATTCCGGC CGCCCGCTGG
GGCACGCCCG ACGACCTCAA GGGCACGGCG GTCTTCCTCG CCTCCTCCGC CTCGGACTAC
GTCAACGGCT ACACGATCGC CGTCGACGGT GGCTGGCTGG CCCGGTAA
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| Protein sequence | MSSILEKFSL NGKVAVVTGA ARGLGQGMAL ALAEAGADIV AVDILPADDT KKQVEALGRK
AITLAANLGD RAAIPQVIAN ARKQFAHLDV LVNCAGIIRR EDFTKFSEKD WDDVMGINID
AVFFLSQAFV RDAIERNAPA KIINIASMLS FQGGIRVPSY TASKSAVQGL TRLMANELAA
KGINVNAIAP GYMATDNTAP LRADEKRSAA ILERIPAARW GTPDDLKGTA VFLASSASDY
VNGYTIAVDG GWLAR
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