Gene Oter_4213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4213 
Symbol 
ID6208450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5438093 
End bp5438731 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID641693881 
Producturease accessory protein UreG 
Protein accessionYP_001821086 
Protein GI182416020 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.920735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAA CAACGAGGCG CGCGCCGCGG GTGGGCATCG GCGGCCCGGT GGGATCGGGC 
AAAACGATGC TCTGCCTGAA GCTTTGCCAG CGGCTGCGCG AGCGGCTCTC GATGGCGGTC
GTGACGAACG ACATCTATTG CTCCGAGGAT GCGCAGTTCC TGATCCGGCA GAGCGCGCTG
CCCGCCGCGC GCATCGCCGG CGTGGAGACG GGCGGCTGCC CGCACACGGC GATTCGCGAC
GACACCACGA TGAACGAGCA GGCGTGTCGC GCGCTCGAGG CGACGTTTCC CGAACTCGAC
CTGCTGCTGG TGGAGAGCGG CGGGGACAAT CTCACGGCGA CGTTTTCGCC GGAGCTGGTC
GATGCGTTCA TCTACGTGAT CGACGTGGCG GAAGGGGACA AAATTCCGCG CAAAGGCGGG
CCGGCAATCC GGTTCAGCGA TCTGCTGATC ATCAACAAAG TCGACCTGGC GCCGCTGGTC
GGCGCGGATC TCGAGGTGAT GGCGCGCGAT GCCACGGCGC AGCGCGGCGG GCGGCCATTT
CTCCTCTGCG ACCTCAAGCG GGAGCACAAT CTCGACGCGG TGATCGGCTG GCTCGAGCGC
GAGGTGCTGT TCGCGCGCAC GGCGGCGCCC GTGGGCTGA
 
Protein sequence
MRTTTRRAPR VGIGGPVGSG KTMLCLKLCQ RLRERLSMAV VTNDIYCSED AQFLIRQSAL 
PAARIAGVET GGCPHTAIRD DTTMNEQACR ALEATFPELD LLLVESGGDN LTATFSPELV
DAFIYVIDVA EGDKIPRKGG PAIRFSDLLI INKVDLAPLV GADLEVMARD ATAQRGGRPF
LLCDLKREHN LDAVIGWLER EVLFARTAAP VG