| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4190 |
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| Symbol | |
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| ID | 6207712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5414552 |
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| End bp | 5417314 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693858 |
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| Product | 2-oxoglutarate dehydrogenase, E1 subunit |
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| Protein accession | YP_001821063 |
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| Protein GI | 182415997 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.133168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC TTAATGTCTC CGCCAACGCC AATACCGCTG TGATCGAAGC GGCGTATGAG
GCATGGCTCA AGCAACCCGA CTCCGTCGAT CCGACGTGGC GCGCCTTTTT CCAAGGCTTC
ACGCTCGGCA CGAGCGGCGG ATCGCTCGGC ACGGAGGGCG CGAATCTTCG GATCATCGAC
AGCTACAAGC AGGCGCAGGT CGGCCGGTTC ATCAACGCGC ACCGCGCCCA CGGCCATCTC
CAGGCGCACC TCGACCCCTT GGGCGAGCCA CCGCCCGCGG ACCCGAAACT GACGCTGTCG
TATTTCGGGC TCGACGAAAA CGACCTGGGC GAGTCCTTCA CGCTCACCAA CTTCAAGGGC
GGCGGCCAGA TGAAGCTGCG GGACATCGTC GACGCGTTGC GGCAGACCTA CTGCGGCCAC
ATCGGGGTCG AGTACATGCA CGTGCAGGAA CACGCCGCGC GCGAGTGGCT GCAGGTGCGG
ATGGAGCAGA CGAACAACCA GCCGCGCTTC TCCCGCGCCG AGAAGATCCG GATCCTCCGC
CGGCTCCACA AGGCCGAGCT GTTCGAAAAG TTTCTCCACA CGAAATACGT CGGCCAGAAG
CGCTTCTCGG GCGAAGGCGC GGAGACCTTC ATCGCCGCGA TCGATGCGAT GCTCGAGAAA
TGCCCCGAGC TCGGCGTCGA GGAGATCGTC ATGGGCATGG CGCACCGCGG CCGGCTCAAC
GTCCTCACCT CGATCATGCG CAAGCCCTTC GAGGTGCTGT TCGAGCAGTT TTCGGAAAAC
TACCTCCCCG AGTCCGTGGC CGGCGACGGC GACGTGAAAT ACCATCTCGG CTACGAGGCG
ATTCTCGACA CGTCCTCGGG ACAAAAGGTC GAGATCCGGC TCGCGGCCAA TCCCTCGCAC
CTCGAGATCG TCGATCCTGT GGTCGAGGGC AAGGCCCGCG CCCGCCAGCG CGTGCGCCAT
GCCACCTCCG AGCGCCAGCG CGTCCTGCCG TTCCTCATCC ACGGCGACGC CGCGTTCGCC
GGCCAGGGGA TCGTCGCCGA AACGCTCAAC TTCTCGCAGC TGCCCGGCTA CACCACCGGC
GGCACCGTTC ACCTCGTCAT CAACAACCAG ATCGGCTTCA CCACGCTGCC GCACGAAGCG
CGCTCGACGC GCTACTGCAC CGACGTCGCG AAGATGGTCG AGGCGCCGAT CTTCCATGTG
AACGGTGACG ATGCCGAAGC CGTGTGCCTG GTCGCGCAGC TCGCGCTCGA GTTCCGCGTG
CGGTTCCAGC GCGACGTCGT CATCGACATG GTCTGCTACC GCAAGCACGG CCACAACGAG
GCCGACGAGC CCGCGTTCAC GCAGCCCGTG CTCTACCGCC AGATCGCCGC GCATCCGCTC
GTCTCGTCCA TTCTCACCGA GAAGCTCGTG CGCGAGGGCA CGATCACGCC GGACGAAGCC
GAAGCGATCA AGGCCGAGTA TACCGCCGCG CTCGAGGCGA ATTTCGAACG CGCCAAAGCC
CGCGAAAAGG AAAAGGAAGG CGCGCGGAGC GTGCAGCAAT CCCAGGCGAT CGAACGCGAG
AAGTTCAAGG GCTCCACCGC GTTCTTCCAA CCCGCCTATC GCCACTCCAC GATCGACACC
GGCGCGGAGC CGGCGCTGAT CAACCGCGTG GTCGCGGGGC TCACGACGAT TCCGGGCAGC
TTCAAGCTCA ACCCGAAGAT CCGCCGGTTC CTCGACAACC GCATCCGCGC GCATCGCGAA
GGCGGGCCCA TCGACTGGGG TTTCGGCGAA GCGCTGGCGT TCGGCACGCT GCTGCTCGAC
GGCACGCCGA TCCGGCTGAG CGGCCAGGAC TGCGAGCGCG GCACGTTCAG TCACCGCCAC
GCCGTGCTCT ACGACGTCGA CACGCGTGAG CAATACGTCC CGCTGAAAAA CCTCGATCCG
CAGCAGCCCG CGTTCTGCGT CTACAATTCG CTGCTCTCCG AAGCCGGCGT GCTCGGGTTC
GACTACGGCT ACTCGATGGA CTACCCCCAG ATGCTCTGCA TCTGGGAGGC GCAGTTCGGC
GATTTCGTCA ACGGCGCGCA GGTCGTGATC GATCAGTTTA TCGCGAGCAG CGAATCGAAG
TGGCAGCGAG CCAGCGGCAT CGTGCTGCTG CTGCCGCACG GCTACGAGGG CCAGGGGCCG
GAGCATTCCT CCGCGCGGCT CGAGCGTTTC CTCGGGCTGT GCGCCGAGGA CAACATCCAG
GTGACCAACA TCACCACCCC GGCCAACTTC TTCCACCTGC TCCGGCGACA GATGAAACGC
GACTTCCGCA AGCCGCTCGT CGTCATGTCG CCCAAATCGC TGCTCCGGCA CCCGGCGTGC
GTTTCGCGAC TCGACGAATT CACCTCCGGC CGGTTCCAGG AGGTGCTGGA CGATCCGAAG
CCGCCCGCCA AGGTCGAGCG GGTGATCTAC TGCAGCGGCA AGGTGTATTA CGATCTCTGT
GACTTCCGCG ATCGCCACCA CCTCAACGAC GTCGCGATCG TCCGGATCGA GCAGCTTTAT
CCGCTCCACC GCGACCGGCT CGCCGCGGTC GCCGACCGCT ACAACGGCGC GCGCATCGTG
TGGTGCCAGG AAGAGCCGCA GAACATGGGC GCGTGGACGT TCATCGCGCC GCGCCTCGCG
GAGATCTACG GCTTTCCGCC AAAATACGCC GGCCGCGACG CCGCCGCCTC ACCCGCGGTC
GGGGCCCTCG CGCTGCACAA ATTCGAACTC AACGCGCTGC TCCAGGACGC GTTCAATATC
TAG
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| Protein sequence | MKPLNVSANA NTAVIEAAYE AWLKQPDSVD PTWRAFFQGF TLGTSGGSLG TEGANLRIID
SYKQAQVGRF INAHRAHGHL QAHLDPLGEP PPADPKLTLS YFGLDENDLG ESFTLTNFKG
GGQMKLRDIV DALRQTYCGH IGVEYMHVQE HAAREWLQVR MEQTNNQPRF SRAEKIRILR
RLHKAELFEK FLHTKYVGQK RFSGEGAETF IAAIDAMLEK CPELGVEEIV MGMAHRGRLN
VLTSIMRKPF EVLFEQFSEN YLPESVAGDG DVKYHLGYEA ILDTSSGQKV EIRLAANPSH
LEIVDPVVEG KARARQRVRH ATSERQRVLP FLIHGDAAFA GQGIVAETLN FSQLPGYTTG
GTVHLVINNQ IGFTTLPHEA RSTRYCTDVA KMVEAPIFHV NGDDAEAVCL VAQLALEFRV
RFQRDVVIDM VCYRKHGHNE ADEPAFTQPV LYRQIAAHPL VSSILTEKLV REGTITPDEA
EAIKAEYTAA LEANFERAKA REKEKEGARS VQQSQAIERE KFKGSTAFFQ PAYRHSTIDT
GAEPALINRV VAGLTTIPGS FKLNPKIRRF LDNRIRAHRE GGPIDWGFGE ALAFGTLLLD
GTPIRLSGQD CERGTFSHRH AVLYDVDTRE QYVPLKNLDP QQPAFCVYNS LLSEAGVLGF
DYGYSMDYPQ MLCIWEAQFG DFVNGAQVVI DQFIASSESK WQRASGIVLL LPHGYEGQGP
EHSSARLERF LGLCAEDNIQ VTNITTPANF FHLLRRQMKR DFRKPLVVMS PKSLLRHPAC
VSRLDEFTSG RFQEVLDDPK PPAKVERVIY CSGKVYYDLC DFRDRHHLND VAIVRIEQLY
PLHRDRLAAV ADRYNGARIV WCQEEPQNMG AWTFIAPRLA EIYGFPPKYA GRDAAASPAV
GALALHKFEL NALLQDAFNI
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