Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4183 |
Symbol | |
ID | 6208190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5407825 |
End bp | 5408547 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641693851 |
Product | ABC transporter related |
Protein accession | YP_001821056 |
Protein GI | 182415990 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.804613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAG TCAAAGGCCT GGTCAAAACC TACGGCACCA AGCGCGCGGT CAATGGCGTG AGTTTCTCCG TTCGCCGCGG CGATATTCTC GGTTTTCTCG GGCCCAATGG CGCCGGCAAA TCGACCACGA TGAAGCTGAT CACCGGCTTC CTGCGGCCCA ATGCCGGCAC CGCCATGGTC GATGGCATCG ACGTCACCCT CGATCCCGTC GCGGTGAAAT CGAAGCTCGG CTACCTGCCC GAAAGCGCGC CGGCTTATCC GGAAATGACC GTCGAGGAGT TCCTCGGCTT CATCGCGGAG GTGCGCGGAT TTCGAGCGAA GGACGCGCGG CAAGCTGCCG TCGAGCGCGT GATCGCCCTC ACCCACCTCG TCAGCGTCCG GAAGCAGACG ATTGAAACGC TCTCGAAAGG CTACAAGCAA CGCGTCGGCT TCGCGCAGGC CCTGCTGCAC GATCCGCCGG TGCTGGTCCT CGACGAACCC ACCGATGGTC TCGATCCGAA TCAGAAGAAC GAGGTCCGCG CGCTGATCAA AAAAATGGCT GCCGAAAAGG CCGTCATCCT CTCGACCCAC ATTCTCGAGG AGGTCGACGC CATCTGCAAT CGGGTGATCA TCATCTCGGA GGGCAGGATC GTCGTCGACG AAACGCCGGC GCAGCTTCGG GCCCGCCAGC CGGGCGCGCG GCTCGACGAG ATCTTCCGCA CCCTCACCAG CGTCGACGCC TGA
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Protein sequence | MIEVKGLVKT YGTKRAVNGV SFSVRRGDIL GFLGPNGAGK STTMKLITGF LRPNAGTAMV DGIDVTLDPV AVKSKLGYLP ESAPAYPEMT VEEFLGFIAE VRGFRAKDAR QAAVERVIAL THLVSVRKQT IETLSKGYKQ RVGFAQALLH DPPVLVLDEP TDGLDPNQKN EVRALIKKMA AEKAVILSTH ILEEVDAICN RVIIISEGRI VVDETPAQLR ARQPGARLDE IFRTLTSVDA
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