| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4175 |
|---|
| Symbol | |
|---|
| ID | 6208264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5398838 |
|---|
| End bp | 5401402 |
|---|
| Gene Length | 2565 bp |
|---|
| Protein Length | 854 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641693843 |
|---|
| Product | TPR repeat-containing serine/threonin protein kinase |
|---|
| Protein accession | YP_001821048 |
|---|
| Protein GI | 182415982 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGC TCTCCAGCCG CGAACGCGAA ATTTTTGCCG CGGCACTGGA CTGTGTTACG
CCGGTCGAGC GCGCAGCTTT TCTCGAAGCC ACCTGCGGGG CCGACGGCGC TCTGCGCGCT
CGCGTCGAGA CCTTGCTGCG CGCGCACGAT TCGGCCGGTC GCTTCATGGA AGCCGACGCG
CACGCGTCGA GCACGCTCGA AGGCGAAGCG GCGATTCCCG AAGGCCCCGG CACGATCGTC
GACCGTTATC GGCTGCTGGA AAAGATCGGC GAAGGCGGCT TTGGTATTGT CTACCGCGCA
GAGCAGCAAC AACCCGTCCG CCGCCTCGTC GCGCTGAAGA TCATCAAGCT CGGCATGGAT
ACACGCGCGG TGGTCGCCCG TTTCGAGGCG GAGCGGCAGG CGCTCGCCGT GATGGATCAC
CCGGCCATCG CCAAGGTCCT CGACGGCGGC GCGACGGCAA GTGGCCGCCC GTATTTCGTG
ATGGAACTGG TGTCCGGCGT TCCGATCACG ACGTTTTGTA CGGAACGCCG CCTGACCGTG
ATCGAGCGAA TCGATCTTTT CGTGCGCGTG TGCGAAGCCA TCCAGCATGC GCACCAAAAA
GGCCTCATTC ACCGCGATCT GAAACCGTCC AACGTACTGG TGGCGCTGCA AGACGGCCGG
CCCGCGCCGA AAGTGATCGA CTTCGGCATT GCCAAAGCCA CTGAACAGCG ACTGTCCGAG
CACACCGTCT TCAGCCGACT GCATCCGTTC ATCGGCACCC CGGCCTACAT GAGTCCTGAA
CAGGCCGGCA GCGACAGTGT CGACGTCGAT ACCCGCAGCG ACATCTACAG CCTCGGCGTG
CTGCTCTACG AGTTGCTGAC CGATCAGACG CCCTTCGACG CCCGCGCGTT GCTCCGGGCG
GGCTATGCTG AGATTCAACG GAGGATCCGG GAACAGGAAC CACCCGCGCC CTCGCGGCGA
CTCGCGACGC TCGACCAGCA GGAGCGGACC ACGGCGGCAC AACGCCGCCG GCTCGAGCCG
GCCAAGCTCA CCAGCCAGCT GCGCGGCGAT CTCGATCGCA TCGTGATGAA GTGCCTCGAG
AAAAACCGCG CGCTCCGCTA TGAGTCGAGC AGCGCGCTCG CGACCGATTT GACGCGGCAT
TTGCGCCATG AACCGATTCT CGCCCGCCCC GCGTCGCTAC GCTACCGCTC GGGAAAATTC
GTCCGGCGCC ATGCCCACGG ACTCGCCGCA GCCGCGTTGG CAGTCGCCGC ATTCGGCGCG
TTTGTCGTGT TTCACACGGT GCAACTCACC ACCGAGCGCG ACCGCGCACA GCACCAGGCG
GCCAAGGCGA CAGCCCTCGT GCGGCTGCTG ACCGAGATGC TGACCGCAGC CGACCCCTAC
CAATTTCGCA ATTCGGCCGA ACCGACGGTA CGTTCACTGC TGGATCGCGG CGCAGCGCAG
GCGCGCACGC AACTCGCAGA CCAGCCCGAA CTGCAGGCGG AGATGCTCAC GATCATCGGA
CGCGTCTATC AGCGTCTAGG CCGGCACAAG GAGGCGCGCC CGCTGCTTGA ACATGCCCTG
AAGCTTGGTC GCCCGTTGGC GAACCAACCC AACTTGCTCG CCGAAACGCT CAACGACCTC
GGCGTACTTC TGGCGAAGCA GGCAAAATAC GACGAGGCCG AAGCACTCTT AACCGAGTCA
CTGACGCTCC GGCGTCAGCA ACGCGAGGCC TCAGCCGAGG TCGCCGTCAC GCTCGTCGAA
CTCGGCCGCG TTCACATCGA TCGCGGTTTT CCAACCCAGG CTGAGCCCTT GTTCCGCGAA
GCGCTGGCCA TCCGGCGCCG CGTGCTCGGT GCGAGGCATC GCGAAACCGC GACGAGCCTC
AGCGACCTGG GCTTGCTGTT ATGGCAAACT GGCGACGTGG CCGGCGCAGA GGCTCATCTG
CGAGAATGCT GGGAGATCAG CAAGGAAGCG CTTGGCGACC ATCATGCCGA CGTGGGCACC
GCGCTTGCCA ACCTCGCGCT GCCCGTACTG TACCGCGGGG ATCGTCCGCT TGCCGAACAA
ATGCTGCGGC AGGCGCTCGC ACTGCGGCGC CGTGCACTCG GGGCCGAACA TCCCCAGATC
GCCAGTACGC TCGACAAGCT CGCGCACGCA CTGCGCGAAC AGGCGAAGTT CGACGAAGCT
GAATCGTGTG CCACGGAGGC GATCACCATT GCCCGTAAAG GGTACGGCGA AGGGCACCCG
AAAGCAGTCA CGTGTATGAT CAACCTCGCG CAGATTCTCC TTGAGCGGGG CGAGCCCGCG
CGCGCGGAGC CGCTCGCCCG CACCGCGTTT GAACTGCGCC GACAGCAGTT TCCTGACGGC
GACTGGCATG TCGCGGTGCC GCAGAGCGTA CTTGGGGCCA CGCTCACTGC GCTCGGTCGC
TATAGCGAGG CAGAGCCTTT GCTCGTCGAG GCGGGCAACC GGCTGAAGGA CATCCCCGGG
CCGCAAGGCC GCGAAGCCGC CGCCAATCGT GCTCGGCTCG CCGCGCTGCG CCGGGCCTCA
CCGCGAACTA CGACGTCCGA AACCTCTCCC TTGGCGCGCG AGTAA
|
|---|
| Protein sequence | MSELSSRERE IFAAALDCVT PVERAAFLEA TCGADGALRA RVETLLRAHD SAGRFMEADA
HASSTLEGEA AIPEGPGTIV DRYRLLEKIG EGGFGIVYRA EQQQPVRRLV ALKIIKLGMD
TRAVVARFEA ERQALAVMDH PAIAKVLDGG ATASGRPYFV MELVSGVPIT TFCTERRLTV
IERIDLFVRV CEAIQHAHQK GLIHRDLKPS NVLVALQDGR PAPKVIDFGI AKATEQRLSE
HTVFSRLHPF IGTPAYMSPE QAGSDSVDVD TRSDIYSLGV LLYELLTDQT PFDARALLRA
GYAEIQRRIR EQEPPAPSRR LATLDQQERT TAAQRRRLEP AKLTSQLRGD LDRIVMKCLE
KNRALRYESS SALATDLTRH LRHEPILARP ASLRYRSGKF VRRHAHGLAA AALAVAAFGA
FVVFHTVQLT TERDRAQHQA AKATALVRLL TEMLTAADPY QFRNSAEPTV RSLLDRGAAQ
ARTQLADQPE LQAEMLTIIG RVYQRLGRHK EARPLLEHAL KLGRPLANQP NLLAETLNDL
GVLLAKQAKY DEAEALLTES LTLRRQQREA SAEVAVTLVE LGRVHIDRGF PTQAEPLFRE
ALAIRRRVLG ARHRETATSL SDLGLLLWQT GDVAGAEAHL RECWEISKEA LGDHHADVGT
ALANLALPVL YRGDRPLAEQ MLRQALALRR RALGAEHPQI ASTLDKLAHA LREQAKFDEA
ESCATEAITI ARKGYGEGHP KAVTCMINLA QILLERGEPA RAEPLARTAF ELRRQQFPDG
DWHVAVPQSV LGATLTALGR YSEAEPLLVE AGNRLKDIPG PQGREAAANR ARLAALRRAS
PRTTTSETSP LARE
|
|---|
| |