Gene Oter_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4168 
Symbol 
ID6205420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5391293 
End bp5392051 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content62% 
IMG OID641693836 
ProductFeS assembly ATPase SufC 
Protein accessionYP_001821041 
Protein GI182415975 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.141156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCC TCGTCATCCA AGACCTGCAC ATCTCCATCG GTGACAAGCC GATCGTCAAA 
GGCCTCACGC TCACCATCAA CCAAGGTGAG GTCCACGCGA TCATGGGGCC GAACGGCACC
GGCAAGTCCA CGCTCGCGAA AGCCATCGCC GGCCATCCCG ACTACACGAT CACGTCCGGC
GACGTGGTGA TCGACGGCAA GTCGATCCTC GAACTCGAAC CCGATGAGCG TGCGCGCGCC
GGCATCTTTC TCGCTTTTCA GTATCCGAGC GAGATTCCCG GTGTGACCAT CGCCAACTTC
CTGCGCGCCG CGCTGCAGGC CCGGCTGTCC GAGGGCGAGG AGCTCGACGC GACCGCCTAC
TACAAACGGC TCTACTCCAA GATGGACCTG CTCAAGATCG ACCGGAAGTT CACCTCCCGG
GCCGTGAACG ATGGTTTCTC CGGCGGCGAA AAGAAACGCT GCGAGATACT GCAGATGGCC
ATGATCGAGC CGGCCTTCGC GCTGATGGAC GAGACCGACT CCGGGCTCGA TATCGATGCG
CTGCGGATCG TCGCCGATGG CGTGAATGCG CTGCGCGGCG AGAAGCTCGG CATTCTGCTC
ATCACCCACT ATCAGCGGCT CCTCAACCAC ATCATCCCGG ATTTCGTGCA CGTGATGTAC
GATGGCCGCA TCGTGAAGAG CGGCGACAAG GACCTCGCGC TGCACCTCGA GGAACACGGC
TACGATTGGG TCAAGAAGGA GGCCGAGGCG ACCGCCTAA
 
Protein sequence
MSSLVIQDLH ISIGDKPIVK GLTLTINQGE VHAIMGPNGT GKSTLAKAIA GHPDYTITSG 
DVVIDGKSIL ELEPDERARA GIFLAFQYPS EIPGVTIANF LRAALQARLS EGEELDATAY
YKRLYSKMDL LKIDRKFTSR AVNDGFSGGE KKRCEILQMA MIEPAFALMD ETDSGLDIDA
LRIVADGVNA LRGEKLGILL ITHYQRLLNH IIPDFVHVMY DGRIVKSGDK DLALHLEEHG
YDWVKKEAEA TA