| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4159 |
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| Symbol | |
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| ID | 6208108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5376619 |
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| End bp | 5379033 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693828 |
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| Product | permease |
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| Protein accession | YP_001821033 |
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| Protein GI | 182415967 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.437191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCAAG ACCTTCGCTT TGCCCTGCGG ATGATCCGCA CTCACCGCTG GTTTTCCGCC
GCCGTCATCG TGACGCTCGC GCTCGGCATC GGCGTCAACA CCACCGTCTT CACGCTGGTC
AACGTCGTGC TCTTCAAGCC CGTGCCGGTC CCCGGCGGTG ACCGGCTCGT CGCGATCTCC
CAGCAGCTGC CCGGCGATCA GCGCAACCAC GGTCCGGTCT CTCTTCCCGA ATACCGTGCC
TACCGCGATC AGAACCGCTC GTTCGCGCAG CTCGAGGCGA CGAACCGTTC CTCCGGCATC
CTGAGCGAGC AGGACAACCC GGCCGAGCGC TATCAACTCG CCGAGGTCAC TCCCGGGCTT
TTCGCCGCGC TGCAAACGCC GCCGATCCTC GGGCGCGCTT TTACGCCCAC TGACGGCGAG
GCCGGCGCGC CGATGGTCGT GCTGCTCGGT CACGCGGTCT GGCAGAAGCG CTACGGCGGT
GTGCCAGACG TGGTCGGCCG CGCCGTGCGG CTCAACGACC AGCCAGCCAC GATCGTCGGC
GTCATGCCTG AGGGCTTTCA GTTTCCCAAC AACGAGGAAA TCTGGTCGGC CTACCGGCCG
ACCAAAGAGC GCGAGGAACG CACCCGCCGC GATCTGCTGC TCTTCGGTTT GCTGAACCCC
GGCGTCAGCC GCAGCGACGC CCAAGGTGAC CTCACCGTCA TTGCCGCCCG CCTCGCGAAG
GATTTTCCCG ACACGAACAA GGGCGTTGCG CCGCTGGTGC AGACTTTCCA CGACCTGTTC
AACGGCGGGC CCATCAAGCT CATCTTCCTG CTGATGCTGG CCGCCACGGG CTTCGTGTTG
CTGATCGCCT GCGCGAATGT CGCCAACATG ATGCTGAGTC GGGCCATCGC GCGCGGCCAT
GAGATCGCCG TGCGTGCGGC CCTCGGTGCC TCCCGCGCGC GGCTCGTCCG CCAACTGCTC
GTGGAAAGCG TGCTGCTCAG CGTGCTCGGG GGCATGCTCG GGCTCGCCCT CTCGGCCTTC
GGCGTGCACT GGTTCGACCT GCAGACGCAG GACGTCGGCA AGCCCTACTG GGTGCAGTTC
ACGATGGATT GGCGCGGGTT CGCTTACTTT GCCGCCGTCT CCGTGCTGAG CGGCATCGTC
TTCGGACTCA TGCCGTCGCT GCGCGCTTCC CGCGTCGACC TGAACACCGC GATGAAAGCC
AGTTCGGCCG CGAGCGGCCG GCGGGGTGGC CGGCTGACCG CGGCCCTCGT GGTCTTTCAG
TTCGCCGCCA CGGTCGTGCT GCTCGCAAGT GCCGGCCTGA TGATCCGCAA CATCCTCGCG
GTGCAGCAGG TGAATCCGAC CGTGCCAGCC GACCGGCTGC TCACAGCGCG CGTCTACCTC
CCGGATGGCA AGGGCGAGCG CTACGAAAGC GAGGATGCGC GCCGGGCGAT GCACGAACGA
CTGCTCGCGC GGTTGTCCGC ACTGCCCGGC GTCACGAGCG CGGTGCTGAC TTCGGATTTT
CCCGGCCTCG GCTCGCAGGT GCGCGACGTC GAGATCGAAG GCCGGCCGGC CCCGGATCCG
AAGCAGCCGT TCCGTGCCGC GCCGTTGTTT TCCTCCGCTG ACTATCTGGC GACGATTCGC
GTGCCGCTGC TCTCCGGGCG CATGCTCACC GAGGACGACG GCGCCAAGGG CAAGGAAACC
GCCGTAGTCT CACGCGCGTT CGCTGAACGC TATTGGCCCG CCGACCTGCC GCTCGGCCGG
CGGTTTCGTT TCCTCAACGA CGGCAAGCCC GGCCCGTGGG TCACGGTCGT CGGCGTCTGC
GGCGATTTCG TGCAGGACAT GCAGGACCGC GCGCAGCCGC CCCTCGTCTA CCTCTCGCAT
CGGCAGGAGC CGTGGGCCTG GCTCGGGCTG ATGCTCCGCA CCGACGGCAA TCCGGCGGCG
CTCGCCCGCT CCGTGCGCAC CGCCGTGCAG GAGATTGATC CCGACCTTCC GTTGTTCGAA
GTGCGGCCGC TCCGCGAGGC GATCGCTCAC AACCTTTGGT TTTTGTCGGT GTTCGGCACG
CTGTTCCTCA CATTCGCCCT GGTCGCGCTG CTCATGGCGT CGGTCGGGCT CTATGCCGTC
GTCGCGCAAA ACACCGCGCG GCGCACCCGC GAGGTCGGCA TCCGAATGGC GCTCGGCGCC
ACGGCGGGCC GGGTCGTGCG GCACATGCTG AGCCGCGGAC TCGTTCAGCT CGCCGCCGGT
CTCGTCCTCG GTCTCGCGAG TGCGTTCGCC GCCACGCGGC TGCTCGACCG TTTTCTGGGC
CTGGTCTCAC CGCAGGATCC GGCGACGTTT GCCGCCGTGC TGGCGTTGCT GAGCGCGATC
GGCGCGTTGG CCAGCTGGCT GCCCGCGCGC CGGGCCGCGC ACGTGGAGCC GACGACGGCA
CTGCGCGCCG AGTAA
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| Protein sequence | MLQDLRFALR MIRTHRWFSA AVIVTLALGI GVNTTVFTLV NVVLFKPVPV PGGDRLVAIS
QQLPGDQRNH GPVSLPEYRA YRDQNRSFAQ LEATNRSSGI LSEQDNPAER YQLAEVTPGL
FAALQTPPIL GRAFTPTDGE AGAPMVVLLG HAVWQKRYGG VPDVVGRAVR LNDQPATIVG
VMPEGFQFPN NEEIWSAYRP TKEREERTRR DLLLFGLLNP GVSRSDAQGD LTVIAARLAK
DFPDTNKGVA PLVQTFHDLF NGGPIKLIFL LMLAATGFVL LIACANVANM MLSRAIARGH
EIAVRAALGA SRARLVRQLL VESVLLSVLG GMLGLALSAF GVHWFDLQTQ DVGKPYWVQF
TMDWRGFAYF AAVSVLSGIV FGLMPSLRAS RVDLNTAMKA SSAASGRRGG RLTAALVVFQ
FAATVVLLAS AGLMIRNILA VQQVNPTVPA DRLLTARVYL PDGKGERYES EDARRAMHER
LLARLSALPG VTSAVLTSDF PGLGSQVRDV EIEGRPAPDP KQPFRAAPLF SSADYLATIR
VPLLSGRMLT EDDGAKGKET AVVSRAFAER YWPADLPLGR RFRFLNDGKP GPWVTVVGVC
GDFVQDMQDR AQPPLVYLSH RQEPWAWLGL MLRTDGNPAA LARSVRTAVQ EIDPDLPLFE
VRPLREAIAH NLWFLSVFGT LFLTFALVAL LMASVGLYAV VAQNTARRTR EVGIRMALGA
TAGRVVRHML SRGLVQLAAG LVLGLASAFA ATRLLDRFLG LVSPQDPATF AAVLALLSAI
GALASWLPAR RAAHVEPTTA LRAE
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