| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4149 |
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| Symbol | |
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| ID | 6207876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5365870 |
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| End bp | 5366760 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693818 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001821023 |
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| Protein GI | 182415957 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00598191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.10352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCT GGAAACAATC ACAGCGCCGC GCGGCGCCCT GGTTTCTCCT GCCGGCGCTG
GCACTGCTCG GCGTGTTCGT CGTCTGGCCG CTGCTGCGCG CGCTCGGGTG GAGTTTCACC
AACGCCGACC TGCTCGCCGT CGAGCGCGCC ACGTGGGTCG GAGCCGGCAA CTACTCCGAT
CTGCTGACGG ATCCGCGGTT TCGCCAGGCC TTCGCCAATA CCGCTCTTTT CGCCGTGATG
GTCGTGCCCG TGCAAACCGC GCTCGCGTTC GCGCTCGCGC TGTGGGTGAA CCGTCCCGAG
CCGGCGTGGC GCTGGCTGCG CACCGCGTTT TTCGTGCCGG TGATCGTCGC GATGCCGGTA
CTCGCGGTGC TCTGGACCAT GCTGTACCAG CCAACGCAGG GCGATCAGAC AGGACTGATC
AACGCGGCGC TCGGCTGGCT GGGCGTGCCC CCACAAGCCT GGCTGCGTGA TCCCGCGCTG
GCGCTGCCGG CGCTGGCGTT CATGTCCGTA TGGCAAGGCG TCGGGCTGCA GATGCTCGTG
TTTGTTGCCG GACTGCAGCA AGTGCCGCGC GAGTTGCTGG ACGCCGCGCG GATCGACGGC
GCGGGCGGCT GGCAGCGGCT GGTGCATGTG GTGCTGCCGT CGGTGCGCAA CACGGTGGTC
TTCGTGGTCA CGGTCACCAC CATCCTCGCG TTCCGGATTT TCGTGCAGCC GTATCTGATG
ACACGCGGCG GCCCCGGCAA CCGCACCGTC TCGATCATAC AGTCGATCTA CGAGATGACG
TTTCTCGATC AGGATCTGGG CCACGCCTGC GCCGCCGCGC TGCTGTTCCT GTTGCTCGTC
GCCGCGCTGA CGCTGCTGCA GCGGCGCTGG CTGAAGGAGG ATCGCGGATG A
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| Protein sequence | MIAWKQSQRR AAPWFLLPAL ALLGVFVVWP LLRALGWSFT NADLLAVERA TWVGAGNYSD
LLTDPRFRQA FANTALFAVM VVPVQTALAF ALALWVNRPE PAWRWLRTAF FVPVIVAMPV
LAVLWTMLYQ PTQGDQTGLI NAALGWLGVP PQAWLRDPAL ALPALAFMSV WQGVGLQMLV
FVAGLQQVPR ELLDAARIDG AGGWQRLVHV VLPSVRNTVV FVVTVTTILA FRIFVQPYLM
TRGGPGNRTV SIIQSIYEMT FLDQDLGHAC AAALLFLLLV AALTLLQRRW LKEDRG
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